Oncorhynchus nerka (sockeye salmon): 115143089
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Entry
115143089 CDS
T07952
Name
(RefSeq) LIM domain and actin-binding protein 1-like isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115143089
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115143089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
DUF1202
Motif
Other DBs
NCBI-GeneID:
115143089
NCBI-ProteinID:
XP_029538976
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All DBs
Position
LG15:complement(32204063..32231394)
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AA seq
727 aa
AA seq
DB search
MGGGLVLTSRVFLTANIWESLITLTRHRDQREGRQTDSSYRTLPVYNLDSPLRLASLSQS
VESLPPTLRSGNLSVLKKRWEQPAPRQDKPSLQPAGPPRARLIPPAVPKPVPPTEHRPPA
KSPGSPGTQGSQDSIQYPSAAITKEGAERRMERKDQRPSEGEEEEEGLMQVEDKVAPPSP
CSPVEKPSVPLNSLKMMFEKGEGAKRRVSTGLHSSSSEDMDQRIGVLSPDRVLETTSLKE
RMAKYQSALTKKGPLARTASQSEGEDGSLKENVPPSGVAVSQALESYSRKVAVEETNGDG
MDTPTSKDSTSSPSSAHSDPPKAARKFCLPVRETCIACLKTVYPLERLVANTQIFHTSCF
RCLHCNTKLSLGNYASLHGNVYCKPHFSQLFKAKGNYDEGFGHRPHKELWTPRAEGEEEE
EGVDREVEKKPKEQAERVAVVSRPASSGKQPSPTVEESPLAKVTDLTASLETRSHTTSTE
KLSSAEKVPEARKLRVAWPPPADSDAGTSQILEAGSGVSRPWRAKWPPEGEVSSSTLSHD
RSELKSLRRSSSLKERSRPFSVAPSLTTNALGPREPRRPLKSLLDRRGSLEDSHSMPKEP
EPKPQREREVRQEDKKECKPAPPSGSVVNGETSSEEEVESLPAAQEEREEPMERGKEIEG
ASLKCQSASPDIPASPSPSPQPKHNRSSQDVGFWEGEEEGGEGEQLTVEEMIKRNRYYEE
EEEEDDV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggggggtgggctggttcttacttccagagtttttctaactgctaacatctgggagagc
ttgatcacccttactcggcacagagaccagagggaaggacggcagactgattccagctac
aggactctccctgtctacaacctagactccccactacgcctcgcctcgctctcacagtcg
gtggagagccttcctcccactctgcgttcagggaacctgagtgttctgaagaagcgctgg
gagcagccggcacctcgccaagacaaaccctccctgcaaccagccggcccaccccgcgcc
cgccttatccccccagctgtacccaaaccagtgccaccgactgagcaccgccccccagcc
aaatctccaggatccccgggcactcaaggtagtcaagacagtatccagtatccttcagca
gctataaccaaggaaggagcggagagaaggatggagagaaaagatcagcggccaagtgag
ggagaggaggaggaggaagggctgatgcaggtggaagataaggtggcgccacccagcccc
tgcagccccgttgagaaacccagcgtgcctctcaacagcctgaagatgatgtttgagaag
ggagagggcgccaagagaagggtgagcacgggactacacagcagctcctccgaggacatg
gaccagagaataggagtgttatcccctgaccgagttctggagaccacctccctgaaggaa
agaatggccaagtaccagtcagcccttaccaaaaagggcccactagcacgcactgccagt
cagtcagagggagaggacggcagcctcaaggagaatgtgccccctagtggtgtggctgtg
agccaggctttagagtcctacagcagaaaagttgctgtagaagagaccaatggtgatggc
atggacacacctacctctaaggatagtacctcttctccatcctcagcccacagtgacccg
cccaaggcagccaggaagttctgcctgcccgtgagggagacgtgcattgcatgcctgaag
acggtgtacccgttggagaggctggtggctaacacccagatcttccacacctcctgcttc
cgctgtctgcactgcaacaccaagctcagtctgggaaactacgcctctctgcacggcaat
gtctactgcaagccccacttcagccagctgttcaaggccaaaggcaactacgacgaaggc
ttcggccaccggccccacaaggaactgtggacaccccgtgccgagggagaggaggaggaa
gagggagtagaccgggaggtggagaagaagccaaaggagcaggcagaaagagtggcggtg
gtgtcccgtccagcctcgtcaggcaagcagcccagccccacagtggaggagtctcccctg
gccaaggtgacggacctgactgcctctctggagacacgcagccacaccacctccactgag
aaactctccagcgccgagaaagtcccagaggcccgcaagctgagggttgcctggccccct
cctgccgacagcgatgctggtacctctcaaattctggaggctggtagtggtgtgagccgg
ccctggagagccaagtggcccccagagggtgaggtgtcatcgtccaccctgagccacgac
aggtccgagctgaagagcctgaggaggagctcgtctctgaaggagcgaagtcggcctttc
tcggtggcccccagcctcaccaccaatgccctcgggccacgggagccccgcaggcccctc
aaatccctgctggataggagggggtcactggaggacagccactccatgcctaaggaacca
gaacccaaaccccagagggagagagaggtaaggcaggaggacaaaaaggagtgcaagccc
gccccgcccagcggcagtgtggtgaatggagagaccagctccgaggaggaggtagagagt
ctgccggcggcacaggaggagagagaagagccgatggagagaggaaaggaaatagaaggg
gcttctctgaaatgccaaagtgcctctccggatatcccagcatctccctctccgtccccg
cagcccaaacacaaccgcagctcccaggacgtgggcttctgggagggcgaggaggagggg
ggcgagggggagcagctcaccgtagaggagatgatcaagaggaaccgctactatgaggaa
gaggaggaggaagatgatgtctga
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