KEGG   Oncorhynchus nerka (sockeye salmon): 115143094
Entry
115143094         CDS       T07952                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115143094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115143094
   03041 Spliceosome [BR:one03041]
    115143094
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115143094
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115143094
Spliceosome [BR:one03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    115143094
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_3
Other DBs
NCBI-GeneID: 115143094
NCBI-ProteinID: XP_029539026
LinkDB
Position
LG15:complement(32323233..32330323)
AA seq 371 aa
MSKESPREPEQLRKLFIGGLSFETTDESLRTHFERWGSLTDCVVMKDPVTKRSRGFGFVT
YSSVDEVDASMEARPHKVDGRQVEPKRAVSREDSSRPGAHTTVKKIFVGGIKEDTEEHHL
RDYFDQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTVNGHNCEVRKAL
SKEDMNRSGPRGGNFGRGGGYGGGFGGGRGGGGGYGDNDGYNNYGGNGGGYGGGPGGYGG
GNRGYGGGGGGGYGNQGGSYGGGGGYDNYNNGGGGGGGSYRGGNYGASSGGGSSSGSGGG
GGGGDYNDFGNYNSQSSSSYGPMKGGSGYSGGSGGGRSSNPYGGGGGVGGGGGYGGGSGG
GYGGGSGGRRF
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgtcgaaggagtctccccgtgagccggagcagctccgcaagctcttcattggtgggctg
agcttcgagactaccgacgagagtttgcggacccattttgaaagatggggatccctcaca
gattgtgtggtaatgaaagatccagtcacaaagagatcgaggggctttggctttgtcact
tacagctctgtggatgaagttgatgcatcaatggaggctcgtcctcataaggttgatggc
cgccaagtggagcccaagagagcggtgtccagagaggattcctcaaggccaggtgcacac
accactgtgaagaagatctttgtgggtggcatcaaggaggacacagaggagcatcacctt
agggactactttgatcaatttggcaagatcgaagtcatcgacatcatgactgataggacc
agcgggaagaagagggggtttgcctttgttacatttgatgatcatgatgcagtcgatagg
attgtcatccagaagtatcatacagtgaatggtcacaactgtgaagtgaggaaggctttg
tcaaaggaagacatgaaccggtccgggccaagaggtggaaactttggtagaggtggcgga
tatggaggtggtttcggtggagggagaggaggaggtggaggatatggtgataacgatgga
tacaataactatggaggcaatggtggcggctatggtggaggtcccggcgggtatggtggt
ggcaaccggggctatggcggaggcggcggcggtggttatggtaaccagggtggcagctat
ggaggaggaggaggatacgacaactacaacaatggaggtggtggtggtggtggaagctac
agaggtggtaactacggagctagtagtggtggtgggagcagcagtggaagtggtggtggt
ggtggtggtggagactacaatgactttggcaattacaacagccagtcgtcctccagctac
ggcccaatgaaaggaggcagcggctatagtggcggcagtggagggggccggagcagcaac
ccatatggtggtggtggtggtgttggtggtggtggtggttacggaggaggctccggtggt
ggatatggagggggctccggaggtcgaaggttctag

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