Oncorhynchus nerka (sockeye salmon): 115143097
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Entry
115143097 CDS
T07952
Name
(RefSeq) retinoic acid receptor gamma-like isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115143097
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115143097
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115143097
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
115143097
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115143097
NCBI-ProteinID:
XP_029539031
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Position
LG15:complement(32646585..32712937)
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AA seq
493 aa
AA seq
DB search
MATNRERQVGHMTGFSPAVYPFAFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRIYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEVVLPESYELSG
ELEELVNKVSKAHKDTFPSLVQLGKYTTNSSADHRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTELVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHLFPRMLMKVTDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
SSDSGDSASAAAPPAIQAIKKEREEEKSLEEEDEEDEWGDEDRERGADSDGEPWGEAAVA
AGGSQKGATGRAQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaatagggaacggcaggtgggtcacatgactggcttttcacctgctgtctac
ccctttgccttcaactccatgaggagccactcccccttcgacctgctggccaatagcagc
ctgtttggacgatttggggcagacctaccgaaagagatggctgcattgtcagtagagacc
cagagcaccagctctgaggagatggtgcccagttcaccctctccgccccctcctccccgc
atctacaagccttgcttcgtgtgccaggacaagtcctctggataccactatggggtcagc
tcatgtgagggctgcaagggattcttccggcgcagtattcagaagaacatggtgtatact
tgccaccgagacaagaactgtcagatcaacaaggtgacccgtaaccgctgtcagtactgc
cggctgcagaagtgctttgaggtcggcatgtccaaagaagcggtgcgtaatgacaggaac
aagaagaagaaagatgtgaaggaggaggtggtgttgccggagagctatgagctcagtgga
gaactggaggagctagtcaacaaagtcagcaaggcccacaaagacaccttcccctcactc
gtccagctgggcaaatacactacaaactccagtgcagaccaccgtgtgcagttggatctg
gggctgtgggataagttcagtgaactttccaccaagtgcatcatcaaaatagtggagttt
gccaagcgcctgccaggcttcaccaccctcaccatcgctgaccagatcacacttctcaaa
tcagcctgtctggacatactgatgctgaggatctgcactcgctacactccggagcaggac
acaatgaccttctcagacgggctgaccctgaaccggacccagatgcacaacgcaggcttc
ggcccgctcacagaactggtgtttgcctttgctggccagctgctgcctctggagatggac
gacacagagactggcctcctcagtgccatctgcctcatctgtggagaccgtatggacttg
gaggagccccagaaggtagacaagctgcaggagcccctcctggaggccctaaagatctac
gcccgccgcagacgccccaacaagccacatttgttcccccgtatgctgatgaaggtcacg
gatctcaggggcatcagcaccaagggtgcagagagggccatcactctgaagatggagatc
ccaggccccatgcctcctctgatcagggagatgctggagaaccctgaagcctttgaggac
agcagcgactctggggacagcgcctctgccgccgccccccccgccatccaggccatcaag
aaagagagagaggaggagaagagcctggaggaggaagatgaggaggacgaatggggggat
gaggatagggagagaggggcggacagcgatggggagccttggggggaggctgcagtggca
gcaggggggtcccagaaaggggcgactgggagagcccagtga
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integrated database retrieval system
