Oncorhynchus nerka (sockeye salmon): 115143103
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Entry
115143103 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115143103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115143103
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115143103
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115143103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
Baculo_IE-1
RNase_E_G_Thio
zf-RING_11
zf-RING_10
zf-RING_4
YdjO
zf-rbx1
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115143103
NCBI-ProteinID:
XP_029539043
LinkDB
All DBs
Position
LG15:complement(33101379..33117786)
Genome browser
AA seq
999 aa
AA seq
DB search
MSDEDMETSPTEMNINHEVSGPEQQRPHDLSQIQIHVPTGTSSGPVPVIQSQPQRSSVSQ
SAFTYKLFLQAGVSEDVSEEDSSARETADRFSETFGGGTPSATCVNIPSSDDDPDLYQAD
NDFKVKHPSAPLYDSRHSGNPHSSSSKEMSVDYPAEGDDGSARNKQSQRDQHSPINPQST
QDVDPDLYQAPLYDPRHFGNPRSSSSKEMSVDYPAEGDNGSARNKQSQRDQHSPINPQST
QDVDLNQAKDETDETEEKQTTLDEATVYVSVLWPGKHILSWKSILQKSLQSWLNNNFKET
DCTVERLNGYLAEVKIHPPSVVEDLLKLKEAWVTFKDKAKTSATVRFHGAIPFKPWNQSN
SKPSSMEDLPPTSNMPEDVKLPIPVSASIDIGGYKPEVRAGPHRHYHTTDHKLAVKGSFD
EVNQFHREFTKIVREAETEPEADWNDNAEAAQSMTHNGMKTHEEPVQKEMSFPVPLNHFV
YLNQAYRKEMEDIEKRNGVKINAEVKVSIIEDTQTTGRDVMLTKAHQEFSDLFQKYVVDL
DSISTHLTHGDPGDLMNTLKNIQNEETRLVLNVSANGCVVFGPAQSIMAVRKALGVKTTI
MTFGMDHSSTEKASGFAGGPVLRSPKTPRMIGMDIKDPLFSHGLAMDQTHWDLMKSAFHE
KITAIKNKFRVDFMEEKSPGKVKIKTRPTTPHTPPAVSLESHAIRALMHLYQKVATSAMS
CHLLDPTHAKTVGDKLEEIHPRHRCVWAGENYGPWRLIGLPQHLGPAVKELEMMLKRPMF
KEEDKHKIEYPGDRSSTGAAMGGAVGDGGATGGPEDDNCSICMDRFINKRKLSCSHEFCT
ECLRKAVKFSGPTCPLCKDVFGKVEGDQPEGTMKVKHESYHCIPGYHGYGVIVISYDIPG
GKQTKKHSNPGKGFIGAHRTAYLPDNQEGNEVLKLLERAFNQKLIFTVGTSRTTGTDDCV
TWNDIHHKTNIDGGAQVFGYPDPDYLSRVKSELKAKGIE
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgaggacatggaaacatcacctacagagatgaacataaaccatgaagtctct
ggaccagaacagcaacggccccatgacctttcgcaaatacagattcatgtgcccacagga
acatccagtggccctgtaccagtgatacagtcacagcctcaacggtctagtgtttctcaa
agtgcttttacttacaagttattccttcaggcaggagtatccgaggacgtgtctgaagaa
gactcatcagcccgagagactgccgatcggttctctgagacttttggaggagggacacct
tcagcaacctgtgttaatatcccaagctctgatgacgacccagacctgtatcaagcagat
aatgactttaaggtgaagcatccctcagcacccctgtatgactccaggcactctggcaat
cctcattcatcctcttccaaagagatgagtgtggattatcctgctgaaggagatgatggc
tctgctagaaacaaacaatcacagcgagatcaacattctcccatcaacccccaaagcact
caggatgtggacccagacctgtatcaagcacccctgtatgaccccagacactttggcaat
cctcggtcatcctcttccaaagagatgagtgtggattatcctgctgaaggagataatggc
tctgctagaaacaaacaatcacagcgagatcaacattctcccatcaacccccaaagcact
caggatgtggacctgaatcaggcaaaggacgagacggacgagaccgaggaaaagcagacc
actttagatgaggctacagtctatgtcagtgtgttgtggcctgggaaacatatattgtca
tggaagtctatacttcaaaaaagtctccagtcatggttgaataataactttaaagaaacc
gattgcaccgtggaaaggctgaacggatacttggccgaagtcaagatacatcccccatca
gtcgttgaggaccttctgaagctgaaggaagcgtgggtgaccttcaaagacaaggccaag
acatcagccactgtgcggtttcatggggctataccatttaaaccctggaatcaatcaaac
agtaaacccagctcaatggaagacttgcctccaacatccaacatgccagaggatgtcaaa
ctcccaatacctgtaagtgctagcattgacatcggtggctacaaacctgaagtacgggcc
ggccctcaccgtcattaccacaccaccgatcacaagttggctgtaaaagggagctttgat
gaagtgaaccagttccacagagagtttaccaagatcgtcagggaagcggaaaccgagcca
gaagcggattggaacgataatgcagaagcggcacaaagcatgactcacaatggaatgaag
acccatgaagaacctgtgcagaaggaaatgagctttccagtcccactgaaccactttgtg
tacttgaatcaggcctaccggaaggagatggaggacatagagaaaagaaatggagtcaaa
atcaatgcagaagtgaaggtgtccatcatagaggacacacagacaacaggcagagatgtt
atgctgaccaaagcccaccaggagttcagtgacctcttccagaagtatgtagttgatttg
gacagcatttccacccatctgacacatggggatccaggagacctcatgaatacgctgaaa
aacatccagaatgaggagactaggctggtactaaatgtgtctgccaatggctgcgttgtg
tttgggccggctcagagcatcatggcagtcaggaaggctcttggggtgaagactacaata
atgacatttggaatggatcacagctccacagagaaagcatctggatttgctggaggacct
gttttgagatctccaaaaacaccacggatgattgggatggacatcaaagatccacttttc
tcacatgggctggccatggaccagactcactgggatctaatgaaatctgcctttcatgag
aaaataacagcaatcaaaaataaatttagagtggatttcatggaggaaaagtctccaggc
aaggtaaaaattaaaaccagacctacaacaccacacactccaccggcagtctctctggaa
agccacgccatcagagctctcatgcacctctaccagaaggttgcgacatcagcgatgagc
tgccacctgctggaccctacccatgcaaagactgtgggggacaagctggaggagatccac
cctcgacaccgctgtgtctgggcaggagaaaactatggtccctggaggctgatcggccta
ccgcaacatttgggccctgctgtcaaagagctagagatgatgctgaaaaggcctatgttt
aaagaagaagacaagcacaagattgagtatcctggcgacagatccagcactggagcagcc
atggggggagcagtcggagatggaggagcaacaggagggcctgaagatgataattgctcc
atatgcatggacagatttatcaacaagaggaagttgtcctgcagccatgagttttgtaca
gaatgtctgaggaaggcagtgaaattctcaggccccacatgtcctttgtgtaaggatgtg
tttggaaaggtggagggagaccagcctgagggaacaatgaaagtgaaacatgaaagttac
cactgcatacctggataccatggctacggcgtgatagttatcagctatgatataccaggt
ggaaaacagacgaagaaacattccaaccctggaaaagggttcattggggcccatagaaca
gcttatctccctgacaaccaggagggcaacgaagtgctgaagttactggagagagctttc
aaccagaagctgattttcacagttgggacctccagaaccactgggacagacgactgtgtg
acatggaacgacattcaccacaagaccaacatcgatggaggggcacaagtttttggttat
cctgaccctgactacctgagcagagtgaagagtgagctgaaagccaaaggcattgaatga
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integrated database retrieval system
