Oncorhynchus nerka (sockeye salmon): 115143111
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Entry
115143111 CDS
T07952
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115143111
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
115143111
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GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
DUF5365
ApbA
Motif
Other DBs
NCBI-GeneID:
115143111
NCBI-ProteinID:
XP_029539064
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Position
LG15:33577143..33581138
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AA seq
425 aa
AA seq
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MEMERIPSAQPTPKHQQAELSDMQGMDFPMYVYKSRRGMKRGDDSKETYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTTLLENQQQKILSLQNG
MQIEQSSPSQENSEEIFRSGFHVCAKEVLQYLVNQEGHGDLTPSHMVNHLHKVATEVLQG
PPRSPCKPRSEETTIHYQHHQAHREKPAGQPPKPSEGHGKNCVPVIQRRYAHAGGEQSGS
DTDTDSGYGGEQVEHLALHAGYYGQERQLKRALGEKRASFCITQEDEACHKRSRVESSED
ESLSGGESSSSSSSGHGSYMSAYSPHQAQPHPLCMPFYLIPPSAAAYLPMLEKCWYSGAM
PMIYPGLGGSAQGMPSDRHAPSPSIMMSPRGRSPSPPTVAQSPMDSPAFLQVLKQVLPMN
LETKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaggattccaagtgcgcaacccacccccaagcaccagcaggctgagcta
tctgacatgcaagggatggatttccctatgtatgtatacaaatcccgtcggggaatgaaa
cgaggagatgatagcaaggaaacctacaaactgcctcaccgactaatcgagaagaaaagg
cgtgacaggataaacgagtgcatcgctcagttgaaagatttattgcccgagcacctgaaa
cttacaactcttggccatctggagaaggctgtggttttggagctcacgcttaagcatgtg
aaagctctaaccactctactggaaaaccagcagcagaaaatcctcagtctgcagaatggc
atgcaaatcgagcagtcctctcccagccaggagaacagtgaggagatcttccgctcaggc
ttccatgtctgtgccaaggaggtgctgcaatacctggtcaaccaggagggtcacggtgac
cttacaccctcccacatggtcaaccacctgcacaaggtggccactgaggtcctccagggt
cctccccgtagcccctgcaaaccccggtctgaagagaccaccatccactaccaacatcat
caggcccacagggagaagcctgcaggccagccccccaagcccagtgaaggccatgggaag
aactgcgttcccgtcatccagcggaggtatgcccatgcgggtggcgagcagagcggcagc
gatacagacacagacagcggctatggtggcgagcaggttgagcatctggcgttgcatgca
gggtactacggccaggagagacagctgaagagggcgctgggagaaaagagggcgtcattt
tgcattacgcaggaagatgaggcgtgccacaaacgcagccgggtcgagtcatccgaggac
gagtctctctcaggcggagagtcatcctcatcctcctccagcggccacggcagctacatg
agcgcctactcccctcaccaggcccaacctcatcccctttgcatgcccttctacctcatc
cccccctctgccgccgcctatctgcccatgctggagaagtgctggtactcaggggccatg
cccatgatttaccctggcctgggaggctccgcgcagggcatgcctagtgacaggcatgcc
ccctctccctcgatcatgatgtcccccagggggcgctctccctctccccctaccgtagcc
caaagccccatggactccccagccttcctccaagtgttaaagcaggtacttcccatgaac
ttggaaaccaaagactga
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