Oncorhynchus nerka (sockeye salmon): 115143180
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Entry
115143180 CDS
T07952
Name
(RefSeq) integrin beta-7-like isoform X1
KO
K06590
integrin beta 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
one04514
Cell adhesion molecules
one04672
Intestinal immune network for IgA production
one04810
Regulation of actin cytoskeleton
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115143180
04514 Cell adhesion molecules
115143180
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115143180
09142 Cell motility
04820 Cytoskeleton in muscle cells
115143180
04810 Regulation of actin cytoskeleton
115143180
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
115143180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115143180
04515 Cell adhesion molecules [BR:
one04515
]
115143180
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115143180
Cell adhesion molecules [BR:
one04515
]
Integrins
Integrin beta subunits
115143180
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
EGF_2
EGF_integrin
I-EGF_1
EGF_TEN
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
115143180
NCBI-ProteinID:
XP_029539183
LinkDB
All DBs
Position
LG15:36995399..37011091
Genome browser
AA seq
763 aa
AA seq
DB search
MVGIFILGTFLLYCVGQNQIQGVPQGCVSQPSCSACLRSPGCAWCKHKDFLKSGESSERR
CDTAESLRTRRCEQMDIINPRLDPVFLKNNDLSSNSDNVVQLKPQNLLFKLRVGVPQTFN
VSFKRAEGYPIDLYYLMDLSFSMKDDLDTIKNLGQDILSALKKVTQKVRIGFGSFVDKVA
LPYVSQVKAKKNNPCPNRLNICQPAFSFQNILRLTEDVDEFKTRVSDQIISGNLDSPEAG
FDAIMQAAVCQSVIGWNNVTRILVYTSDDTFHIAGDGRLAGISEPHDGMCHLNGTGFYDG
TKYDYPSVGQLARVLAANNIQLIFAVTEDSVAAYKALSKLIPQSVVGVLKNDSSNVVLLI
SEAYSNLSSTILLEHHEAPSDLDVTYRSHCTPEKGDNTHWQRRGECMNVKLNQQVNFTVS
LNISTCLKEKQTFSLKLQGISETLKVSVETLCDCDCQDREEQSSHCNEIGTLTCGICSCD
EGHLGQRCECERPKDMTSAESMAATCRQDNSSQLCSGHGSCECGMCMCQGTHRGNFCQCD
DNSCARHNNMLCGGNGQCECGTCKCNANYTGSACDCSTLTDQCRTAGKLCNGQGTCQCNQ
CQCNKDFFGINCSKIANACPKFLDCVTCELDNKKISGLKSNCSQLCGSVKLTWMKGPQEF
PCSKDTISYKVELLSDGNILIFYADLPRSIDKTYVIIGSSVSSIIFIGIAVILISRLMLE
LHYRREYDSFLKAKEAEVWQDMKNPLFQDATTVVMNPMHVQED
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggttgggatctttatattagggacctttctcttgtactgtgtgggacagaaccaaatt
caaggggtcccccaaggatgtgtgtcccagccctcatgttcagcttgcctgaggagccct
ggatgtgcctggtgcaaacacaaggactttctgaagtctggagagtccagtgagcggagg
tgtgacactgctgagtctctgaggaccaggcgttgtgagcagatggacatcatcaacccc
cgattagatccagtctttctgaagaataatgatctcagcagcaactcagataatgtggtc
cagcttaagccacaaaacctcctcttcaaactcagagtcggagtccctcagaccttcaat
gtctcattcaagagagctgagggctaccccatagacctgtactacctgatggacctgtcc
ttctccatgaaggacgacctggacaccatcaagaacctaggccaggacatcctctctgca
ctgaaaaaagtcacccagaaggtccgcattggcttcggctcatttgtagacaaggtggct
ctgccatacgtcagccaggtgaaggccaagaagaataacccctgtcccaaccgcctgaac
atctgtcaacctgccttcagcttccaaaatattctgagactcacagaagacgtggacgag
ttcaagaccagggtcagcgaccagatcatctctggaaacctggactcccccgaggcaggc
tttgacgcaatcatgcaggcagctgtctgccagagtgtgattggttggaacaatgtcacc
cggatcctggtctacacgtcagatgacaccttccatattgccggggatggcaggctggct
ggtatatccgagcctcatgacggcatgtgccacctcaatggcactggcttctacgatggc
actaaatatgactacccatcggttggccagcttgccagggtcctggcagccaataacatc
cagctcatctttgctgtcaccgaggacagtgttgctgcctacaaggcattgagtaaacta
atccctcagtcagtggtgggggtcctgaagaacgactccagcaacgtggtcctgctcatc
tcagaggcctacagtaacctgtcctccaccatcttactggagcaccatgaagctccctca
gatctggatgtgacctacagatcccactgcacccctgaaaagggggacaacacccattgg
cagaggaggggcgagtgcatgaacgtcaagctcaaccagcaggtcaacttcacggtaagc
ctgaacatttcaacatgtctaaaggagaagcagacgttttccctaaaactgcagggcatc
agcgagaccctgaaggtctctgtggaaaccctgtgtgactgtgactgccaagacagagaa
gaacagtcctcacactgcaatgaaattggaacgctcacctgcggcatctgcagctgtgat
gagggtcacctgggtcagaggtgtgagtgtgagcggcctaaggacatgacctctgccgaa
tctatggccgcaacatgtcgccaagacaactcctcgcagctgtgcagtgggcatgggagc
tgtgagtgtggcatgtgtatgtgtcagggcacccaccgcggcaatttttgccaatgtgat
gacaacagctgtgcccgccacaacaacatgctctgcggtggtaatgggcagtgtgaatgt
ggaacatgtaagtgtaatgccaattacacaggctctgcatgtgactgttccaccctcacc
gaccagtgcaggactgctgggaagctgtgcaatggccagggaacatgccagtgtaaccag
tgccagtgcaacaaagacttctttggcataaactgctcaaagattgctaacgcatgccca
aaattcctggactgtgtgacatgtgaattggacaataaaaagattagcggcctaaagagt
aactgcagccaactctgtggctcagtcaagcttacttggatgaagggaccccaggagttc
ccctgcagtaaagacaccatctcctacaaagtggagctgttgtctgatggcaacatcctg
atcttctacgcagatctgcctcgctctattgacaagacttacgtgatcatcggcagctct
gtgtccagcatcatcttcatcggcatcgcagtgatcctcatcagcaggcttatgctagag
ctccactaccggagagagtatgacagcttcctcaaagcaaaggaggccgaagtctggcaa
gatatgaaaaatcccttgttccaggatgccacgaccgtggtcatgaaccccatgcacgtt
caagaggactga
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