Oncorhynchus nerka (sockeye salmon): 115143186
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Entry
115143186 CDS
T07952
Name
(RefSeq) interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115143186
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115143186
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115143186
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115143186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
115143186
NCBI-ProteinID:
XP_029539189
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Position
LG15:37091885..37098469
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AA seq
506 aa
AA seq
DB search
MIRSIQSSLLPGHIQLQIESMAVTPRRVRLKPWLVAQVDSGLYPGLVWIDRDNKRFRVPW
KHATRHTPQHEEENTIFKAWAVETGKFQEGIDDPDPAKWKAQLRCALNKSREFNLVYDGT
KEVPMNPLKIYDVCDIPQPLSNPGSSDSGSWTPNDCDEDEPDTPEPLPPYPTSNGTSPTL
MWSPPGSVSPLHPPSCPPSVEVWPKEEVKPWPKEEPLDVEMQPSPEEMAPPPPLDMPSPS
MPDMMFASPEMWISSLPMTDLEVQFQYRGKEVCPAMTVSNPQGCRLFYGDLGPMVNQEEL
FGPISLEQLRFPSTEHIANDKQRVFTNRLLDVMDRGLILEVSGHDIYAVRLCQCKVYWSG
PCAPNPNAPNLIERQRKVKMFCLESFLSGVIAHQRGQSASLPQFDINLCFGEEWPDSRPR
ERKLIMVQIIPVVARMITEMFSGDCMRSFDSGSVRLQISIPDIKDNIVTHLKQLYRLLQT
HQGQEGWPQALPLGAGMSLSQALHAQ
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgataagaagtatacaaagtagcctacttcctggtcacattcaactgcagattgaaagc
atggcggtgaccccacggcgtgttcggctcaagccctggctagtggcccaggtggacagt
gggctctacccaggtctggtgtggatcgatcgagacaacaagcgcttcagggtcccctgg
aaacacgctacgcgccacaccccccagcatgaggaagagaacacaatctttaaggcctgg
gcagtggagacaggaaagttccaggagggtattgatgaccctgaccctgccaagtggaaa
gcccagctccgctgtgccctcaacaagagcagagagttcaaccttgtctacgatggcacc
aaagaagttcccatgaaccccctgaagatctacgatgtctgtgacatcccacagcccctc
agtaacccaggatcctcagactctgggtcctggacgccgaatgactgtgatgaagatgaa
ccagatactccagagccccttcctccttatccaacatccaatggtaccagccccactcta
atgtggtctcctccggggtcagtatcgcccctccacccccccagctgccccccatcagtt
gaagtgtggcccaaagaggaggttaagccgtggccaaaagaggagcctttggatgtggag
atgcagccctcccctgaggagatggcgccccctcctccacttgacatgccttccccttcc
atgcctgacatgatgttcgcctccccagagatgtggatcagctccttgcccatgacagac
ctggaggtgcagttccagtaccggggtaaggaggtgtgtccagccatgacagtcagtaat
ccccagggctgcaggctgttttacggggacctgggccccatggtcaaccaggaagagctg
tttggccctatcagcctggagcagctgaggttcccctctaccgagcacatcgccaacgac
aagcagagggtcttcaccaaccgcctgctggacgtcatggaccgaggcctcatcctggag
gtcagtggccatgacatctatgccgtccgcctctgccagtgcaaggtgtactggtcaggc
ccctgtgcacccaaccccaatgcacccaacctcatagagaggcagaggaaggttaagatg
ttctgtctggagtcgtttctcagcggtgtaatagcccatcagaggggccagtcggccagc
cttcctcagttcgacatcaacctgtgctttggagaggagtggcctgacagcagacccagg
gagaggaagctcatcatggtgcagatcatccctgtggtagcacgtatgatcactgagatg
ttctcaggtgactgcatgcgctcctttgacagcggcagcgtgcgcctgcagatctccatc
ccggacatcaaggacaacatcgttacccacctgaagcagctgtaccgcctgctgcagacc
caccagggccaggagggctggcctcaggctctgcccctgggggctggcatgagcctgtcc
caggccctgcacgcccagtga
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