Oncorhynchus nerka (sockeye salmon): 115143204
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Entry
115143204 CDS
T07952
Symbol
usp49
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 49
KO
K11834
ubiquitin carboxyl-terminal hydrolase 44/49 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115143204 (usp49)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115143204 (usp49)
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115143204 (usp49)
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115143204 (usp49)
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115143204 (usp49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
ZapG-like
Motif
Other DBs
NCBI-GeneID:
115143204
NCBI-ProteinID:
XP_029539216
LinkDB
All DBs
Position
LG15:complement(37548416..37555083)
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AA seq
677 aa
AA seq
DB search
MDRCKHVGRLRLGHEHSILNSQKWRCMDCCTTESVWACLKCSHVACGRFMEEHSLKHFQE
SNHPLAMEVRELDVFCFACGDYVLNDNAEGDLKLLRGALSTVRSPGRRSLRSSAGGDCNP
WVGESGPQPAMQTALWHRRKVLLGKMLRRWRNRQQEEQSQREEKLEQEKEEVRRQKNEMK
RRLMGELANVPPRKSARLLTQAPRSTITLIPLKFRDPPERLPPPKKPSLLSLKPPSNGRT
RKLKVRRYYSSHKGTRRRLAPGVTGLRNLGNTCYMNSILQVLSHLQKFRECFLTLDMCET
EELLAKTNQGVAGAVVGSGSAVTPGCPLGRGMGKAASGGLPAVSKQSSPPCLNAAELVQP
KEPRSSTRQQMSLCHELHTLFRVMWSGRWSLVSPFAMLHSVWNLIPAFRGYDQQDAQEFL
CELLDKVQQELESEGSKRRIVIPITQRKLSKQVLKVLNTIFHGQLLSQVTCLSCKHKSNT
VEPFWDLSLEFPERYHSTEKGSAASLAYQRSCSLTEMLAKFTETEALEGSIYACNHCNRR
RRKTSHKPLVLSEACKQLLIYRLPQVLRLHLKRFRWSGRNHREKIGVHVAFDQVLNIEPY
CCTDSGQSVHREGYTYDLSAVVMHHGKGFGSGHYTAYCYNTEGGFWVHCNDSEMNVCSVE
EVCNTQAYILFYTQRSA
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggaccgctgtaagcacgtggggcgtcttcgcctaggccacgaacactccatcctcaac
tcacagaaatggcgctgcatggactgctgcaccaccgagtcagtgtgggcctgtctcaag
tgctctcacgtggcctgtggccgcttcatggaagagcactccctcaaacacttccaggag
tcaaaccaccccctggccatggaagtgcgggagctggatgtcttctgcttcgcctgtgga
gactatgtgctcaacgacaatgctgaaggagacctcaagctcctgcggggggcgctctct
actgtgcgtagccctggcaggcgctccctgcgctcctctgcagggggtgactgtaacccc
tgggtgggtgagagcgggccccagcctgctatgcagacggccctgtggcaccgaaggaag
gtgctgctggggaagatgctgcgccgctggaggaaccggcagcaggaggaacagagccag
cgggaggagaaacttgagcaggagaaggaggaggtccggcgccagaaaaatgagatgaag
aggagactcatgggagagctggccaatgtgccgcccaggaagagtgccaggctgctcacc
caggcgccccgctcaaccatcacacttatccccctgaagttccgcgaccctccggagcgt
ctgcctccgcccaaaaaaccctcccttctatccctgaagccccccagcaatggcaggact
cgtaaactcaaagtacggaggtactactcctcccataaaggaacccgtcgtagactggcc
ccgggggtcactgggctacgcaaccttgggaacacgtgctacatgaactctatcttacag
gtgctgagccacctgcagaaattcagggagtgcttcctcacattggacatgtgtgagact
gaggagctgctggccaagacaaaccagggtgtggctggggctgtggtggggagtggtagt
gcagtcacaccaggctgccctctgggacgtggcatggggaaggcagccagtgggggtctc
cctgctgtcagcaagcagagctcgcccccctgcctaaacgcagcagagctggtccagccc
aaggagccgcgatcctccacccgccagcagatgtcactgtgccacgagctacacacactg
ttcagggtcatgtggtctggccgatggtcgttggtgtcgccctttgccatgctgcactct
gtgtggaacctgatcccagcgttccgtggctacgaccagcaggatgcccaggagttcctg
tgtgagctgctggacaaggtgcagcaagagctggagtcagagggcagcaagcgcaggatc
gtcatccctatcacccagaggaagctgtccaagcaggtgctcaaggtcctcaacacgatc
tttcacggacagctactcagccaggtgacttgtctgtcctgtaagcacaagtcaaacacg
gtggagccattctgggacctgtccctggagttcccggagcgctaccacagcacagagaag
ggctcggctgcgtctctggcctaccagcgcagctgctccctcactgagatgctggccaag
ttcactgagacagaggctctggagggcagcatctatgcttgcaaccactgcaacaggaga
agacggaagacgtcccacaagcccctggttctgtcagaggcatgtaagcagctgctgatc
taccgcctacctcaggttctacggctgcacctcaaacgcttcagatggtcaggccggaac
cacagggagaagattggcgtccatgtggcctttgaccaggttttgaacatagagccctac
tgctgcacagactcaggccagtcggttcacagagagggctacacctacgacctatctgct
gtagtcatgcaccacgggaaaggttttggctcagggcactacactgcatactgctacaac
accgagggaggtttctgggtccactgtaatgactctgagatgaacgtgtgcagtgtggag
gaggtgtgcaacactcaggcctacattttgttctatacccagaggtctgcctag
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