KEGG   Oncorhynchus nerka (sockeye salmon): 115143219
Entry
115143219         CDS       T07952                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115143219
   03400 DNA repair and recombination proteins [BR:one03400]
    115143219
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    115143219
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115143219
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N
Other DBs
NCBI-GeneID: 115143219
NCBI-ProteinID: XP_029539239
LinkDB
Position
LG2:complement(53954522..53984361)
AA seq 1269 aa
MMTSLGGDKARGTRDKVLPAATHTTQPQKQLQATAEQIRLAQMIYDKNDSDFEDKVNQLM
EVTGKNQDECMVALHDCNEDVNRAINFLLESTSDTTSWETVGKKKPLAKEGPAEGKENRE
KRGGEREVSRGRGGSNRRGRGASNRSRQGERVRPEENGVEAVPVDRGSERGRRGGRGGRG
ECHLVALSHMFQSTLPVGSGGRGRGRVPAGSRFSAQGMGTFNPADYTAEQRTGTTQDDSW
ESGAINSTDGTVAWRSTLEDWAAEDWSEDLSETKVFTASSASAPQNHITPGQSLDHVSML
QKPVGGEEAPSSQSLVFTNSHHHPARNGSAIGTGSTSYAHAALSSVLGAGFGDLGQSKRS
QSSPGAQILEQLKGPGLGPLPSSQAAPPPSTQGTSSTSLGSRLPGLGVAPPVLPPPSTSS
WDIKTPEPSTTTTSLTSHFSREFRLQPEPSLVLSHLVQRHGAPSLPLARQSSPPPAQSPS
PSQGPPLAAIGAKPAPSAGPDPQGSSSLQQQHRVPQLKAQKRRIPPTSKIPSSAVEMPGS
ADIPGLNVQFGALDFGSEAALPDFGPVETCVSVVSRAPAPQSQTNLYSKPLSESMGTPLS
IPLPLSSSEPIYHSPSVAMPSLAPSAMGMVSSSTPSSSISSSVPSSSSTSPFVSLGSGYD
CGPVAPHSRLAFSQSKEAPGPIMNGLNSVRTSAMDTSSASSTPKPESPSPSISTSSAPAP
SALMPSSIPPHSSALPSLPHDMPSASLATLSSHGSSSHSSVLGSSSLTYTSVDSSVSSLA
PSSGSYSTGQAPAQSLHQAQAQSLHQAQSLHQAQSLHQAQAQSLHQAQAQSLHQAQAQSL
HQAQSLHQAPAQSLHQVNSSMAHIMGTMSHMNSMVSSMGGTSGLHASQALGLSANGTTAQ
SNLSSAPRTAPLLSSSTGKAHPNLSQGGPPLLPNQYIMGPGGLLPAYPQIYGYEDLHMLQ
SRLPMPSLQDYYGITFPGPTALSGRDGSLANNPYSGEVTKFGRGDSTSPAPPSNLSAQQQ
PQQGQTQAQPQPPQPQGQPQPQGHHSSQQQQAFLPPGYSYTGLPYYPGMPGAAFQYGHTM
FMPQGQGPAKQHGVGLGNPSASPFQQQPSGYGQHTFSSGYEDLTQGQAGVDYSKGYSNSS
QSQAKSAATGAGKGGISVTSGNTGIPEISGSVYNKTQSFDKQGFHTGTPPPFNLPSALGG
PGGAPGGYAPAPFLHILQPAHQQPHSQMLHHHLAQDGQGGPSQRGQSSSIQQKSQVNKSS
YGSSPYWGN
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgatgacctcgttgggtggcgacaaagcccggggcactcgggataaagtgctgcctgct
gccacccacacaactcaaccacagaaacagctccaggcgaccgcagagcagatccggctc
gcccagatgatctatgacaagaatgattctgattttgaggacaaagtgaaccagctgatg
gaggtgaccggaaagaaccaggacgagtgcatggtagcgctccatgactgcaacgaggat
gttaacagagccatcaacttccttcttgagagcacctctgacacgacctcatgggagaca
gtggggaaaaagaaacccctagcgaaggaaggccctgcggagggcaaggagaaccgggag
aaaagaggaggagagagggaggtcagcaggggccgcgggggaagcaaccggagaggcaga
ggggccagcaatcgcagtcgccagggggagagagtgcggccagaggagaatggtgtggaa
gcggtccctgtggacagagggtcagagcgaggccgcaggggtgggagagggggtagaggt
gagtgtcatttagtggcactttctcatatgttccagtcaacactcccagtcggatctgga
ggcagaggaaggggcagggtgccagcgggaagcaggttctcagcccagggaatggggacc
tttaacccagcagactacactgcagaacagaggacagggaccacacaagatgactcctgg
gagtcaggagccatcaacagcacagacgggacagtggcctggaggagtactctagaggac
tgggctgctgaggactggagcgaggatctctctgagaccaaagtgttcactgcctcaagt
gcatcggcacctcagaaccacatcacacctgggcaaagcctggaccatgtgtctatgctg
cagaagccagtgggaggagaagaggccccctcctctcagagcctggtcttcacaaactcc
caccatcaccccgcccgcaacgggtcggccatcggcacaggcagtaccagctacgcacat
gccgccctgtcgtcagtgctgggggcaggttttggggacctgggtcagtctaagaggagt
cagtccagtccaggggcccagatcttggagcagctgaagggcccaggcctgggtcctctc
ccctcctcccaggcagccccccctcccagcacacaggggaccagcagcacctctctgggg
agtagactcccagggttaggagtagcgcccccggtcctccctccgccttccacttccagc
tgggacatcaagaccccagagcctagcaccaccaccacctcactcacctcccacttcagc
cgagagtttagactgcagcctgagccgtccctggtgctgagccatctagtccagagacac
ggcgccccctctctgcccctggcgcgccagtccagccccccgccagcccaatccccctcc
cccagccagggaccccccctggccgccatcggtgccaagcctgcccccagcgcagggccg
gaccctcagggcagcagctcgctgcagcagcagcaccgcgttcctcaactaaaggctcag
aaacgaaggatacctcccacctccaagatcccttcgtcggcggtggaaatgcccggctct
gccgacatccccggtctcaacgttcagttcggagcgctggactttggctcggaggccgca
ctgccggactttggccccgtggagacatgtgtcagcgtggtctccagggcccccgcccca
cagagccagaccaacctctactccaaacccctcagtgaatctatgggcacccctctttct
attcccctccctctgtcctcctctgagcccatctaccactccccgtcggtggccatgccc
agcctcgccccctccgctatgggtatggtcagctcctccactccctcctcctccatttcc
tcctcagtgccctcctcctcctccacttctcccttcgtctcactgggaagcggttatgac
tgtgggcctgtggcccctcactcacgcctggccttctcccagagcaaagaggcccccgga
ccaatcatgaacggtctgaacagtgtgaggacgtctgcgatggacacttcatcagcctcc
tccactccaaagccagaatctccctctccgagcatcagtaccagcagtgctcctgccccc
tctgccctcatgccctcctccatacccccccacagctcagcacttcccagtctgccacac
gacatgccctctgccagcttggcaacactgagcagtcatggcagcagtagtcattcctca
gtgctcggctccagctctctcacttacaccagtgtggacagtagtgtgagctctctggcg
ccctcgtctggctcctactcaactggccaggccccggcccagtcgctgcatcaggcccag
gcccagtcgctgcaccaggcccagtcgctgcaccaggcccagtcgctgcaccaggcccag
gcccagtcgctgcaccaggcccaggctcagtcgctgcaccaggcccaggctcagtcgctg
caccaggctcagtcgctgcaccaggccccggcccagtctctgcaccaggtcaacagcagc
atggctcacatcatgggcaccatgagccacatgaacagtatggtcagtagcatgggtggc
accagcgggctacacgccagccaagcactggggctcagcgccaatggaaccacagcccaa
tcaaacctctcctcggcccccaggaccgcaccactgctctcctcctcaactggtaaagct
catcctaacctgtcccagggagggcccccactactgcccaaccagtacatcatgggccca
ggaggcctgctgccagcctacccgcagatctatggctatgaggacctccacatgctgcag
tccagactgcctatgccctctttgcaggattattacggaatcacattccctggccccaca
gcactctctggcagagatgggagcctcgccaataacccctactcaggtgaagtcacaaag
tttggcaggggtgactccacctcccctgcaccccccagcaacttgtcagcccaacagcag
ccccaacaaggccagacccaggcccagcctcaaccccctcagcctcaaggccagccccag
cctcagggccaccacagcagccagcagcagcaggccttcctcccgccgggctacagctac
acgggcctgccctactatcccgggatgcccggcgctgccttccagtacggccacaccatg
ttcatgccccagggacaagggccagccaaacagcacggtgtgggtctgggtaacccatca
gcaagccccttccagcagcagcccagcggctacggccagcacactttcagctcagggtat
gaggacctgacccagggccaagcaggagtggactacagcaaaggctacagcaactcatcc
cagagtcaggccaaatctgctgctacaggtgctggtaaaggcggcatctctgtgacgtca
ggcaacaccgggatcccagaaatcagtggcagtgtttacaacaagacccagtcctttgat
aagcagggtttccatacggggactccccctcccttcaacctgccctcagctctggggggt
cctggaggggccccagggggctatgctcctgcccccttcctccacatcctgcagcctgcc
caccagcaaccccactcccagatgctgcaccatcacctggctcaggacggacagggcggt
cctagccagcgaggccagtctagcagcatccagcagaagagccaggtcaacaagtccagc
tacggcagctccccatactggggcaactga

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