Oncorhynchus nerka (sockeye salmon): 115143225
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Entry
115143225 CDS
T07952
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115143225 (ap5b1)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
115143225 (ap5b1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
DUF190
Motif
Other DBs
NCBI-GeneID:
115143225
NCBI-ProteinID:
XP_029539246
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All DBs
Position
LG15:38044666..38048471
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AA seq
963 aa
AA seq
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MSANWPERISAFLRSPSQFLCSTTSDIFLAEVLHELRDDRASDHIKVLLLSPLLEHPTLL
CPSVFVGEETALELMSVFAQCSPKSLPLRCHLLLALTSVLLCSCCVSSHTSASQDFLDLL
LQMAQDTNDAQAGAALHPLRTTACDCLRELEACLPGLLSQRLELLSSLRQQENSRLHQAY
TGLHALALRNAVYLLTQQKGAGAGDLKTALGSNEGFVWGEGADSAQPNSESHSDLALFSP
LTLGTMGKVPSLQTGLDCKELRSLLSSLLEESYLLTSLSQAALLRRLVEVLAMVPAVSPT
IFRAQLLRLLGTCKVCLLHTTLLMKAAFTDSLFSAEDETFLLKRLVGLSQHPLLSTPEKL
FYMDCILHFPENRPISSGDESLPVLLTPRLAAALVPTVFNDSVSMLARLNLLSLVYLEEG
EEDREGQGGRGLAYLYDHLTSLLRIVENQASREMVVTFFRASFLFLLHFCHVERYSEDLS
QRLCDLYLRRTRLAPHLINLADRTQDRLESGWAVALLRALQRTITEAPLSQLTLQDLRWH
LRILARVAEEGEVLQRATLNFLLCVITSSSSALCVSGDWRLGNSVLGVCRRLLLHPSLDS
LLTPLADLLQHLTCHYGETDIQDHARLYYTLLTTLSQEKLAGVLAQRGTERGRQAKVRSL
SAIMGENEELTSGLTVHQTERPLLMLVKLDKHEPDECRPEHKPDSEPACETESSPGQGGI
EDYRAQFQSSSFASEITLQYHLTHTGVHDPHFDKLFSIRLHFDLTDGHYEEVSDISVPCL
FRTRKPPTVRLRLKPKQPYHTTLRASAIFTTEDGLSWHSPLADLHVAFPEVFLPLLTPLG
WAREKKQRVFEGIWGEICSGQSEGDLTNTATSLFCDQLEDSAVGELVEKYFQRYLVSDLD
KGRCKVLFFLPPQSHVLLKVITEEDAVQVHIATDNWKLLPYINSYLEDITKEIHSTQQVN
GDV
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgaactggcccgagaggatctccgcattcttgcgcagcccgtcccagttcttg
tgcagcacgacatcggacatcttcctcgctgaggtcctgcacgagctgcgagatgacagg
gccagtgaccacatcaaggtcctgctgttgtccccactacttgagcaccctactctgctg
tgcccctctgtctttgtgggcgaggagaccgccctggagctcatgtctgtgtttgcccag
tgctcccccaaatccctcccgctccgctgccaccttctcctggccctcacctccgtgctc
ctctgctcctgctgtgttagttcacacaccagcgcctcccaagacttcctggaccttctc
ttacagatggcccaggacaccaacgacgcacaggctggggctgcattacacccattgagg
acaacagcctgcgactgccttagggagctagaggcttgcctcccgggcctactatcccaa
cgcttggagctcctgagcagcctgaggcagcaggaaaactccaggcttcaccaggcctac
acggggctccatgccctggccctgaggaatgctgtgtatctgctcacccagcagaaaggg
gctggggctggagacctgaagactgcactggggagcaacgaggggtttgtgtggggggag
ggtgcagactccgcacaaccgaactctgagtcacactcagacttggccctcttctcgccc
ctcactctgggcaccatgggaaaagttccttccctgcagacgggcctagactgtaaagag
ctgagatcgctactctcctccctcttagaggagtcctacctgctcacatccctatcccag
gctgccctgctgcgacggctggtggaggtgcttgccatggtgcccgcagtctccccaacg
atattcagggcacagctgctgcgtctattgggcacatgcaaggtgtgtcttcttcatacc
actctgctgatgaaggctgctttcacagacagcctgttcagcgcagaggatgaaaccttc
cttctaaagcgtctcgtcggcctgtcccaacaccccctactgagcacgcctgagaagctc
ttctacatggactgcatcctgcacttcccagagaaccgacctatcagcagtggcgacgag
agcctgcccgtgctcttgacccctcggttggccgcagccctagtgcccactgtgttcaat
gatagtgtcagcatgctggctagactgaacctactctctctggtctacctggaggaagga
gaagaagacagggagggacagggggggagaggcctggcctacctgtacgatcacctaacc
tcccttctccgtattgtggagaaccaggccagtagggagatggtggtgaccttcttcagg
gcttccttcctcttcctccttcacttctgccacgtggagcgctactctgaggacctgtct
cagaggctgtgtgacctgtaccttagacgcactcggctggcccctcacctcatcaacctg
gctgaccggacccaggaccggctggagtcaggctgggctgtggcactgcttagagccctg
caaagaaccatcacagaggccccgctgtcccagctcaccttgcaagacctccgctggcac
ctcaggatcctggcccgcgtggcagaggaaggggaagtcctccagagggccactctcaac
tttctgctgtgcgtcatcacttcctcttcatccgcgctgtgtgtgagcggggactggcgt
ctggggaacagcgtgctgggggtgtgtcgacgcctgctcctgcaccccagcttagactcc
cttctcacaccgctggctgatctcctacagcacctcacctgccattatggtgaaacagac
atccaggaccacgcccgcttgtactacaccctcctcaccactctttcccaggagaagctg
gctggggtgttagcacagaggggaacagaaagggggcggcaggccaaagtgcgctcgctg
tctgccatcatgggtgagaacgaggaactgaccagcggtctgaccgtgcaccagacagag
cgaccgctgctgatgctagtcaaactggacaaacatgaaccagatgaatgcagaccagag
cataaaccagacagtgaaccagcctgtgagactgagagttccccaggacagggtgggata
gaggactacagagcccagttccagagttccagcttcgcctctgaaatcaccctccaatac
cacctcacacacactggagttcacgacccccatttcgacaagctcttcagcatccgcttg
cactttgatctcacggacggccactatgaggaagtgagtgacatcagtgtgccttgcctg
ttcaggaccaggaagccccctacagtgaggctgaggctgaagcccaagcagccgtaccac
accaccctgagagctagcgccatcttcaccacggaggacggcctctcctggcactccccg
ctggcagacctacatgtggccttccctgaggtgtttctgcccctcctcacacccctaggg
tgggccagggaaaagaagcagagggtgtttgaggggatctggggtgaaatatgctcaggg
cagtctgagggggatttgaccaacactgcaactagcctgttctgtgatcagttggaggat
tcggctgtgggtgagctggtggagaagtactttcagagatatctggtctcagacttggat
aaaggcaggtgtaaagtgctcttcttcctcccaccccagtctcacgtgctgctgaaggtt
atcacagaggaggatgccgtccaggttcatattgctacagacaactggaagcttctgcct
tatattaactcttatctagaggacattaccaaagagattcacagcacacagcaagtcaat
ggtgatgtctga
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