Oncorhynchus nerka (sockeye salmon): 115143246
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Entry
115143246 CDS
T07952
Name
(RefSeq) paired box protein Pax-7 isoform X1
KO
K09381
paired box protein 3/7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115143246
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115143246
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
115143246
NCBI-ProteinID:
XP_029539284
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Position
LG15:39075984..39136097
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AA seq
519 aa
AA seq
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MATLPGTVPRMMRPAPGQNYPRTGFPLEGQYAGPEYVYCGTVSTPLGQGRVNQLGGVFIN
GRPLPNHIRHKIVEMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPR
QVATPDVEKRIEEYKRENPGMFSWEIRDKLLKDGVCDRSTVPSGEASSVSSISRVLRARF
GKKDDDDDSDKKDEDGEKKTKHSIDGILGDKGNRTDEGSDVESEPDLPLKRKQRRSRTTF
TAEQLEELEKAFERTHYPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAF
NHLLPGGFPPTGMPSLPTYQLPESSYPGTTLSQDGSSTLHRPQPLPPSSMHQGGLSDGSS
AYGLSSNRHSFSSYSDSFMSQSAASNHMNPVSNGLSPQVMSILSNPNAVPSQSQHDFSIS
PLHGSLESSNPISASCSQRSDSIKGVDSLASSQSYCPPTYSATSYSVDPVTAGYQYSQYG
QTAVDYLAKNVSLSTQRRMKLGDHSAVLGLLQVETGQAY
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggctactttaccaggaacagtgcctcgaatgatgcgccctgcgccaggccagaactac
ccccgcaccggattccctctggaaggacaatatgcaggacctgaatatgtttattgtgga
acagtatcaaccccccttggccaaggtcgggtgaaccagctcggtggagtgttcatcaac
gggaggccgctgccaaatcatatccgacacaagatagtagagatggcacaccacggcatc
cgaccctgcgtaatctcgcgacagctacgagtttcccatggttgcgtctccaaaatcctc
tgtcggtaccaggagaccggttcgattcgtcccggggctataggaggcagcaagcccagg
caggtagcaactccggacgtggagaagcggattgaagagtacaagcgagaaaaccccggg
atgttcagttgggaaattcgggacaagctgctgaaggacggggtgtgcgacagaagcact
gttccttcaggtgaggcttcatctgtgagttccatcagccgagttctgagggcgcgattc
ggcaagaaagatgacgacgacgatagtgataagaaggatgaagacggggaaaagaaaaca
aagcatagcatcgatggcattctcggtgataaaggtaatcgtacagacgagggttcagac
gtggagtcggagccggaccttcccttgaagaggaagcagcgtcgcagccgcaccaccttc
acagccgagcagcttgaggagctggagaaggcctttgagaggacacactacccagacatc
tacaccagggaagagctggcccagaggaccaagctcactgaggcccgcgtacaggtgtgg
ttcagcaacagaagggccagatggcgcaagcaggcaggagccaatcagctggctgccttc
aaccacctgttacctggaggcttcccgcccacggggatgcccagtctacctacctaccag
ctacctgagtcctcgtaccccggcactacactgtcacaggatggcagcagtacgttgcat
cggccccagcccctgcctccgtcctcaatgcaccagggaggactctctgacggcagctcc
gcctacggcctctcgtccaatcgccacagcttctccagctactcagacagcttcatgagc
caatcagcggccagcaatcacatgaacccggtcagcaacggcctctccccacaggtgatg
agcatcctgagtaaccccaacgcggtgccctctcagtcccagcatgacttctccatctcc
cccctccatggcagcctggagtcctccaaccccatctcagccagctgcagccagcgctct
gactccatcaagggggtggacagcctggcttcctcccagtcctactgcccccccacctac
agcgccaccagctacagtgtggaccctgtcactgctggataccagtacagccagtatgga
cagactgcagttgactacctggctaagaacgtgagtctgtccacccagaggaggatgaag
ctgggagaccactctgctgtcctgggactgctgcaggtggagacgggacaggcctactga
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