Oncorhynchus nerka (sockeye salmon): 115143275
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Entry
115143275 CDS
T07952
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 3-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115143275
03012 Translation factors [BR:
one03012
]
115143275
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115143275
mRNA cycle factors
Stress granule specific factors
115143275
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
eIF-4
115143275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
PP_kinase
Motif
Other DBs
NCBI-GeneID:
115143275
NCBI-ProteinID:
XP_029539357
LinkDB
All DBs
Position
LG15:40991187..41063800
Genome browser
AA seq
1803 aa
AA seq
DB search
MSLPAKIVPKPATVAVSGPGTGPSPSSQLRATLTSVSLPSGAPGAPQLNTLPPPQIFLNM
TRPRFSRVQPSLDDRIFPTQPGVAAVYSVPRHPGPPYTAHDYTKGHPNLAGTPPGHAHSQ
ALSQVSLPTASPYRYPKGWEASGVSPYTTGQNSGSAPLVYSPQTQQMNTQPQSRPSSMPS
PSPSPPVMWNHQFATGPRPTHHQGGFRPIQFFQRAQMQTARPTIPTNAPSMRPCSQNPTS
AVYPPNQPTMMMMAPMPFPSPQAAQYYIPQYRHSTPYVGPPQQFSVQPPGSGTFYPGPGP
GEYPAQYAPGPQYYPGQQVYPPSPSIIVPTPQQPPPAKREKKPSSQIRIRDPNQGGRDIT
EEIMAGGTGSRNPTPPVGRPSSTPTPPQQQPGGSQTPEQSQGQANSAYSLELPQQPQQQL
TPGAAASKPGPVDDKPKLELLVQKSSSPGLGQSEPSLERREASASVTAPSPHLDPELPSP
APVVVSPILAPLPVAGPIEQPSAVEPTAPPPSSAADPKHLSLTTQSQTSNTEELLPEAPR
TLAASPALTPKALNGHADTGAEMDTQSQEHYPLAPSLSPTQPQASAPASREDCSEAVPSE
VRAEMPPAVMDPIAPITVMPVTLTSSPAPAVPAPPPGLPPLVQATAETSKLSDTKDIPLN
AGTERLITPNSKLEPQLQALFRKSPTTVCQTVPATPKTWKKPNEGSPVGDALQRETEEEL
KPVEEAAGDQALQPARPHSSSSPPPPSAAPLAMEAEEKPPAPEENGEAELEPMRNGAGHT
SETESSDSGATPGDKEGSTGAPPDLFQEDLPETNGKRQYNRDFLLGFQFMAACTQKPDGL
PQISDVVLDKINQNKLPTRAVESRVISRGPDFTPAFADFGRQMSGGRGAAVSHAHAHQMM
NMGGGARRPPPRKIILNVSANDEVQLKKAENAWKPGMKRAGPSDDPEVITTQELFRKVRS
ILNKLTPQMFNQLMKQVTDLTIDTEERLKGVIDLVFEKAIDEPGFSVAYGNMCRCLTTLK
VPMTDKPNTTVNFRKLLLNRCQKEFERDKVDDVVFERKQKELDSAQSSDQERLRLELEEA
KDKARRRSIGNIRFIGELFKLKMLTEAIMHDCVVKLLKNHDEESLECLCRLLTTIGKDLD
FEKAKPRMDQYFNQMEKIVKERKTSSRIRFMLQDVIDLRLHNWVSRRADQGPKTIEQIHK
EAKIEEQEEQRKVHQQLLSKDTKRRPEQQQREQQREQQREQQREQRVQQREETWNTVPMT
KNSRTIDPTKIPKISKPQMDEKIQLGPRASLNWMKGSSGGAKASDSELSRSGGGGASLNR
YSALQSTPTQPTTPPAQNPEYDTRRTLGSRSSAGKERSEKLLSSAPPRLGSFVRGVSAKE
LLASPALSPEEPHRELESIRRLSVSEDKTEPECSRAREPVKVEPVVAQSPDRPALSEEEM
ERKSKAIIDEFLHINDYKEAVQCVNELDLSSQLHVFVRVGVESTLERSQITRDHMGQLLF
QLVQQGTLPKPQFFKGFADTLELADDMAIDIPHIWLYLAELLSPVLRDGGFSMRELFSEL
SKPLLPVGRAGVLFSEILHILCKQMSHRKVGTLWRKADLSWSDFLPEEEDIQDFISQQKL
QFTVVDCSSPEAALSATELSPEVLNRQLERLLLEDMASDEQIFDWVEANLDESQMSSSPF
LRALMTAVCKAAVKDESTSCRVDVAIIQRRLPVLLKYLNSDTERQLQALYALQALIVTLD
QPPNLLRMFFDCLYDEDVISEDAFYKWETSKDPAEQLGKGVALKSVTAFFTWLREAEEES
EDN
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgccggcgaaaatagtcccaaaacctgccactgtcgcagtaagtggacctgga
actggcccgtctccgtcgagccaactgcgggctaccctgacctcggtgtctttaccgtcg
ggagccccaggcgctcctcaactgaacaccttgccgcctcctcaaattttccttaatatg
acgcgtcccaggttctctcgggttcagccatccctggatgaccgcatcttccccacacag
cccggtgtcgctgccgtctacagcgtaccgaggcaccctggtcctccctacacagctcat
gactacacaaagggacaccctaacttggcgggcacgccgccaggacatgcccactcgcag
gcgctctctcaggtatcattacccacagcttccccatatcgctaccctaagggctgggag
gcaagtggagtgtctccatacaccactggacagaattctggctcagcacctctagtgtac
tctcctcagacgcagcaaatgaacacgcaaccgcagagtcgcccgtcatccatgcccagc
cccagccccagcccccctgtcatgtggaaccaccagttcgcgacgggccctcgaccaacc
caccatcagggaggattcaggcccatccagtttttccagagggctcagatgcagacagcg
cggccaaccatccccacaaacgctccctctatgcggccctgctctcagaaccccacatcg
gcggtgtacccccccaaccagcccaccatgatgatgatggcccccatgcctttcccttcc
ccacaggctgcccagtactacatcccacagtatcgccacagtacgccctatgtggggccg
ccccagcagttttcagtgcagccgccggggtctggcaccttctatcctggccctggccca
ggggagtaccctgctcagtacgctcctggacctcaatactatccaggacagcaggtgtac
cccccctcaccctccatcatagtgcctacaccgcagcaacctccaccagccaagcgtgag
aagaaaccatcctcccagatccgtatccgggaccccaaccagggcggcagggacatcaca
gaggagatcatggcagggggcacagggagccgaaatccaaccccccctgtcggacggccc
tcctccacccccacccctccgcaacagcagccaggcggtagccagactccagagcaaagc
cagggccaggccaactcagcctacagcctggagctcccccagcagccacagcagcagctc
acgcctggggctgcagccagcaagccagggccagttgatgataagccaaaattggagctg
cttgtccagaagtcttcctctcccgggcttggtcaatcagaaccttcattggaaaggcga
gaggccagtgcatctgtaactgctccctctccccacttggatccagagcttccctcccca
gccccagtggtggtttcccccatcctggcccctcttcctgttgctggccctattgagcag
ccctctgccgtggagcccactgctccccctccctcctctgcagcggaccccaagcatctg
tcactcacaactcagtcccagacctcaaacacagaggaacttcttccagaagccccacgc
accctggctgcttccccagccctaacccctaaggctttgaatggccatgctgacactggg
gctgagatggacacccagtctcaggagcactacccccttgctccctccctatccccaacc
cagccccaggcttcagccccagcttctagagaagactgcagtgaggctgtgcccagtgag
gtgagggcagagatgccccctgctgtcatggaccctatcgcaccaatcactgtgatgcca
gtcactctgacctccagccctgcgcctgctgttccagcgcctccccctggccttccgccg
ctagtgcaggccacagcagagaccagcaagctctctgacactaaagacatccctctcaat
gcaggcacagagagactcatcacaccaaacagcaagcttgaaccacagctacaagccctt
ttcagaaagagtcccactacagtatgtcagactgttcctgctacaccaaaaacctggaag
aaaccaaatgaagggagtcctgttggagatgcattacagagggagactgaggaggagctc
aagcctgtggaggaggctgctggagaccaggccctgcagcccgccaggccccatagtagc
agcagcccgcccccaccctcagcagcgcctctagccatggaggcagaggagaagccccct
gccccagaggaaaatggggaagctgagctggagcccatgaggaatggggctgggcacacc
tcggagacagagagcagtgacagtggggccacccctggggacaaggagggctctacagga
gcacccccagacctcttccaggaagatctgccggagaccaacgggaagcgccagtacaac
cgggacttcctgctgggcttccagttcatggctgcctgtacacagaagccagacgggcta
cctcagatcagtgacgtagttctggacaagataaaccaaaacaagctgccaacccgggcg
gtggaatccagggtgatctctcgtggccctgacttcacacctgccttcgctgactttggc
aggcagatgagtggaggacgcggcgctgcagtgagtcacgcacacgctcaccagatgatg
aacatgggggggggtgcccggcggcccccgcccagaaagattatcctgaacgtgtcagcg
aacgacgaggtgcagctgaagaaggccgagaacgcctggaaacctggcatgaagagggcg
gggccgtcagacgaccctgaggtcattacaacacaggagctcttccggaaggtgcgcagc
atcctcaacaaactgacgcctcagatgttcaaccagctgatgaagcaggtgacggacctt
accatcgacacggaggagcgcctcaagggcgtcatcgacctggtctttgagaaggccatc
gacgagcccggcttctctgtggcctacgggaacatgtgccgctgcctcaccacgctcaaa
gtgcccatgacagacaaacccaacaccacagtgaacttccgtaagcttctgctcaaccgc
tgtcagaaggagtttgagcgggacaaggtggacgacgtggtgtttgagaggaaacagaag
gagctcgactctgcacagtccagtgatcaagagagactacggttggagctggaggaggcc
aaggacaaggcccgccggcgctccataggaaatatcaggttcatcggggagctgttcaaa
ctcaagatgctgacagaggccatcatgcacgactgtgtggtcaagctgctgaagaaccat
gacgaggaatcgctggagtgcctgtgcaggctgctcaccaccattggcaaagacctggac
tttgagaaggccaagcctcgcatggatcagtatttcaatcagatggagaaaattgtcaag
gagcggaagacatcgtctcggatacggtttatgctgcaagacgtgatagatctccgattg
cacaactgggtgtccaggagagccgaccagggacccaagaccatcgagcagatccacaaa
gaggccaagattgaagagcaggaggagcagaggaaggtgcaccagcagctgctctccaag
gacaccaagagaaggccagagcagcagcaaagagaacagcagagagaacagcagagagaa
cagcagagggagcagcgtgtgcagcagagagaggagacctggaacactgtgcccatgacc
aagaacagcaggaccattgaccccaccaagatccccaagatctccaagcctcagatggat
gagaagatccaactgggaccacgggcctcactcaactggatgaagggcagtagtggaggg
gccaaagccagtgactctgaattatcccggtctggtggtggtggcgccagtttaaaccgg
tattctgcactccagtccactccaactcaacccaccaccccacctgcacaaaacccagag
tatgacactagaagaaccttgggcagtcgaagcagtgcagggaaagagcgaagcgagaag
ctcttgagctcagccccgccgcggcttggttccttcgttcgaggcgtcagtgccaaagag
ctgctggcgagcccggccctgagtcccgaggagccccacagagagctagagagcatcagg
aggctcagcgtcagcgaggacaaaactgagccagagtgcagcagagccagggagcctgtg
aaagtagagcctgtggttgcccagtctccagacagacctgccctctctgaggaggagatg
gagaggaagtccaaagctatcattgacgagttcttgcacatcaacgactataaggaggct
gtgcagtgtgtgaacgagctggacctgtcctctcagctccacgtgtttgttcgtgtgggg
gtggagtccaccctggagcgcagtcagatcacacgggaccacatgggccagctcctcttc
cagttagtgcagcagggcaccctgcccaagccccagttcttcaaagggtttgctgacacc
cttgaactggcggacgacatggccattgacattccccatatctggctgtatctggccgag
ctgctcagccctgtgctgagagatgggggcttctctatgagagagctctttagtgaatta
agcaaacctttacttcctgttggaagagctggggtcttattttctgaaatactgcacata
ctatgcaaacaaatgagccataggaaagtaggcaccttgtggagaaaggcggacctcagc
tggagtgactttctgccagaggaagaggacatccaggatttcatctcgcagcagaagctc
cagttcactgtggtggactgctctagccctgaggcagccctctctgcgacagaattgtcc
cccgaggtgctcaaccggcagctggagagactcttgctggaggacatggccagtgatgag
cagatctttgactgggtagaggcaaatctagatgaatctcagatgagctcgtctccgttc
ctgagagctctgatgactgctgtgtgtaaggcagcggtgaaagatgaaagcacttcctgt
cgagtggacgtagccatcatacagaggagattgcccgtattactcaagtaccttaactca
gacactgagcgacagcttcaagcactttatgcacttcaggcgctgatagtcacactggat
cagcctcctaacctgctccggatgttctttgactgtctgtatgacgaagacgtcatctcg
gaggacgctttttacaagtgggagaccagcaaggaccccgcggagcagctgggcaaaggt
gtggctctcaagtctgtaaccgcttttttcacctggctgagggaggccgaggaagagtcg
gaggataattga
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