KEGG   Oncorhynchus nerka (sockeye salmon): 115143314
Entry
115143314         CDS       T07952                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL2-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115143314
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:one01009]
    115143314
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115143314
Protein phosphatases and associated proteins [BR:one01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115143314
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     115143314
    Little elongation complex (LEC)
     115143314
SSDB
Motif
Pfam: ELL Occludin_ELL UBR1-like_wing zf-CCHH
Other DBs
NCBI-GeneID: 115143314
NCBI-ProteinID: XP_029539452
LinkDB
Position
LG2:complement(54134658..54170086)
AA seq 738 aa
MAALSVDGRYGLNCGRRNTDHVTVLHVKLTETAFRAIEKYQTSKNVTSSWPTMQFKGLQG
RIKIPRTDSPDGSQNFDFYLSNVGKDNPQGSFECIQQYVSSSGTPHLVSLGVVQDKVTLC
ATNDSYQVTRELMTLAKEDGTKVLKHGGHFKGKKVQIRKPAPSGSEPVAERKRSTPINPA
KTIRKCLANNLVSQRPYRDRLVHLLALRSYKKLELLARMQRDGVSQKDRSSLGSTLQQVA
NLNPKDNSYTLKDFVYREVQRDWLGYSEDDRVQVNGILARKLGLPTEPLSSSGPPKNGFP
GSPQKCQPELPSHFTDPLMPKKPRISHVTSQGPPTTPTSSSRVRRSATKGDNSHHSAAPT
TTATTKRSSLPARPTTAGPPLNHLPHPSQLPVSHRRRMSHHPGLGSNSSSPSTPEGRGTQ
DLPLDQSSTCLDPSSPIASPPGRTADRYGSGMLPPASSSHPALTISSSSSSSSTIIPPPS
PSSSKKSKKHKGKDREKERCREGHSITCDGISPPEVQVEDGQRPRKRHHANGEERRRPVI
PAKSLFCSDEDNKKRPVHSTDSSTTVMPDYIRKYMAVVSMDQRQTYKDNFNAEYEEYRIL
HARVEKITRHFTQLDAQCRRLPPGTKEYQEVHEDMMKEYNKMRLGNVPFTSLGIGISLDQ
RLPPTGPPTPLPAAAGLPTRTDPAWLKKQASSGMQGCMLLHSPNYQVEKQRCEYLHNKLA
HIKRLIADFDQRSSQSWS
NT seq 2217 nt   +upstreamnt  +downstreamnt
atggcggcgctctccgtggatgggaggtatggactgaattgtggccgacggaatacagac
cacgtcactgtattgcacgtaaaattgacagagacagctttcagagcgatagaaaagtac
caaacctctaagaatgtaacgtcctcgtggccaacaatgcaattcaagggactccaaggg
cgtattaagatcccaaggactgactctccagatggatctcagaactttgacttctacctg
tccaacgtgggcaaggacaaccctcagggaagctttgagtgcatccaacaatatgtgtcc
agttcggggaccccgcacctggtgtccttgggggtggttcaagacaaagtcacgttgtgt
gccaccaacgactcctaccaggtgactcgggagcttatgacgctggctaaggaggatgga
accaaagtcctcaagcatggaggccatttcaaaggtaagaaagtccagatccgcaagcca
gcgccgtcaggctctgaaccagtcgcggagcgcaaacgctccacccccatcaacccagcc
aagaccatccgcaagtgccttgccaacaacctggtttcccagcgcccataccgcgaccgc
cttgtccacttgctggcgttgcgctcctacaagaagctggagctactggccaggatgcag
cgggacggggtcagtcagaaggaccgcagctctcttgggagtaccctgcaacaagtggcc
aacctgaaccccaaagataactcgtacactctgaaggactttgtgtaccgtgaggtgcag
agggactggctgggctactctgaggacgaccgcgttcaggtcaatgggattctggcacgg
aaactgggccttcccactgagccgctttcctccagcggtcctcctaaaaatgggttcccg
ggttccccacagaagtgccagcccgagttgccgagtcacttcactgaccccttgatgccc
aagaagccccgcatttcccatgtcaccagccaagggccacccaccacccccacctcgtcc
tctagagtgcgccgcagcgccacgaagggtgacaacagccaccacagcgccgctcccacc
accactgccaccaccaaacgctcgtctctcccagccaggcccaccacggctggcccgccc
ctcaaccacctcccccacccctcccagctgcctgtttctcaccgccgtcgtatgtctcat
caccctggcctgggctccaactccagctcgcccagcacgcctgagggccgtggcacccag
gacctgccccttgaccagagctcaacctgcctggacccctcctcaccgatagccagcccc
ccaggcaggaccgccgaccgctatggctccggcatgctgccaccggccagctccagccac
ccagccctcaccatctcctcttcatcatcctcttcctctaccattatcccccctccctcg
cccagcagtagcaagaagtcaaagaagcacaaagggaaggacagagagaaggagcggtgt
agggaggggcacagcatcacatgcgatggcatcagccccccagaggtacaggttgaggac
ggccaaaggcccaggaagagacaccacgccaacggggaggaaagacgaaggccagtcatc
cccgccaaaagcctattctgctcagacgaagacaataaaaagaggccagtccactccaca
gactcctccaccactgtgatgccagattacatacgtaagtacatggcagtggtgtccatg
gaccagaggcagacttacaaggacaacttcaatgcagagtatgaggagtaccgcatcctg
catgcccgtgtggagaagatcactcgccacttcacccagctagacgctcagtgcaggagg
ctgccgcctggcaccaaagagtaccaggaggtacatgaagacatgatgaaagagtacaac
aaaatgagactaggcaatgtccccttcacttccctaggcattgggatatccttagaccag
agactgccccctactggccctccaacaccacttccagcagcagctggtctcccaaccagg
accgaccctgcttggcttaagaagcaagccagcagtgggatgcagggttgtatgctgctg
catagcccaaactaccaggtggagaagcagcgctgcgagtacctgcacaacaagctggcc
cacatcaagcgcctcatcgctgactttgaccagcgcagttcccaatcctggagctag

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