Oncorhynchus nerka (sockeye salmon): 115143320
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Entry
115143320 CDS
T07952
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115143320
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
MAGI_u5
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Serglycin
Motif
Other DBs
NCBI-GeneID:
115143320
NCBI-ProteinID:
XP_029539462
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All DBs
Position
LG15:complement(43804775..44000943)
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AA seq
1666 aa
AA seq
DB search
MAKVIQKKNHWTTKVNECAVLKDASGDLNVPLLGGAENGEFAFIGQVNEDIVIYKNGKLT
EGELILEVENLSISGLPLYDVQTVINNCKGPVRLKTVRQGTKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPRDGEVPGIDYNFLPVEDFLALEQSGTLLEIGAYEGN
YYGTPKPPRQPPSGKVITSDALQDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSLTGDSSEPDEHPYAPRENAPSYGVNNTLSSTTEDSQQTHIHLSHPPTEEDPLGPL
TDNWEMAYTENGELYFIDHNTKTTSWIDPRCLDKPPKPLEECEDDEGVHTEELDSELELP
TGWEKIDDPVYGVYYVDHINRKTQYENPILEAKRLKQLEQQQPPEGERYIREWIEDATLA
GAPLASYTANHQETYRDPQAGPPLPPLIGPKRGKPFFTRNPAELKGTFINTKLRKSHRGF
GFTVVGGDEPDEFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGYTHAQVVKVFQSI
HIGSMVNLELCRGYPLPFDPDDPNTSMVTSVAIVDKEPIIVNGQDSYDSPSSHGSHTGGP
VNGMRESRPHSPSSAEVASNSSHGYLSDSVTLASSIATQPELITVHMEKGDKGFGFTIAD
SPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEVSMLV
QRGGGVVPAKKSPRLQLARKDSQNSSVSSHRSTHTDSPVHTSLAPPLSKSTAPPPPSQPL
PGLPPQDPQADGTIHRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGYGFRILGGN
EPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVMGKSHQLVVQLMQQAAKQGHVNL
TVRRKTGYGVSKGEGEVPPSPASSHHSSTQAPSLTEGKRTPQGSQNSLNTVSSGSGSGSG
STSGIGSGGGGGSGSAVVNTALQPYDVEIHRGENEGFGFVIVSSVSRPESGTTFAGNACV
AMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLRIIP
GDDSSNASLLTNAEKIATITTTHTPQQQAAPEPRNNTKPKQESSFEFKSPQAPPPPAPTT
QPPAQDAAFYAVDLERENKGFGFSLRGGHEYNMDLYVLRLAEDGAAIRNGNMSVGDEILE
INGESTKGMKHARAIELIKDGGRHAHLVLKRGDGSVPEYDPSIDGAGPAAGVQNASEVST
LPPHNNTPSDTNTSDPHKPSRSKDKKGHHHSKHRHRSPDKKSKSKGGESGETGASSNQSK
RKGDKSKRSGGDNHGTHQHHNNSSGHRHRRHRSPDKGRSRARSAEKTLDSRQSQGHRERE
GRSPDRHHTHRQRSPYRSPRRNRSPYGHRSPYGHRSPYGHRSPYHSRHHSPTRYHRTQSS
DPYRQPSPYRLRGREPERPNGGMAPVLRKPPGPVPNPYREESVLRVPPALDRLNREATLL
REPPALDRLNREAMLLRESREERLFEEDSLLLRASTLERDYRGDGLLSAAARGQRGETMP
RVHTPESDSAYKRYSSLLRGRSPERVEREARYAPREESPDPRYRVQSLGRNISPVRSFIE
LEEEGATAPRLKESYSTLKSDISRASKAPPEPKRKAYKDSPKDLSI
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagtgatccaaaagaagaatcactggaccaccaaagttaacgagtgcgcggtt
ctcaaagacgcttcgggtgacttgaatgtaccattgctgggcggtgcagagaacggagag
ttcgccttcatcggacaagttaacgaggatatcgttatttacaaaaatggaaaattaacg
gagggggagttgatattggaagtagagaacctatcgatctctggattgcctctgtatgat
gtacaaacagtgataaataattgcaagggtcccgtcagattgaaaacagtcagacaagga
accaagctaaataaggacctgaagcactatctgagccagcgcttccagaagtcctccccg
gaccacgaactgcagcagaccattcgagacaacctctaccgccatgctgtgccttgtaca
acccgccccccacgtgacggagaggtccctggaatagattacaacttcctgcctgtggag
gactttctggctttggagcagagtgggacccttctggaaataggagcatatgaaggtaac
tattatggaacacccaagccgccaaggcagccccctagtgggaaagtgattaccagtgat
gctttgcaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagtttaacaggagactcaagtgaacctgacgagcacccctacgccccg
cgtgagaacgccccgtcctacggtgtgaacaacacattgtcatccaccacggaggactct
cagcagacacacatacacctcagccatcctcccacagaagaggaccccctgggacctcta
actgacaactgggagatggcctacacagagaacggagagctctactttatagaccacaac
acaaaaaccacttcctggatcgacccacgctgcctggacaagcctcccaaacctctggaa
gaatgtgaagatgatgaaggggtacacacagaagagctggacagtgagctagagctgcca
acaggctgggagaaaatagatgacccagtctatggtgtttactatgtggatcacattaac
aggaagacccaatatgagaaccctatactggaggctaagcggctgaagcagctcgagcaa
cagcagccaccagaaggtgagcgctacatccgagaatggatagaggacgccaccctggct
ggtgccccgctggccagctataccgccaaccaccaggagacctacagggatccccaggct
ggacccccactgccgcccctcatcgggcccaaacgagggaagcccttcttcacgcggaac
ccagcagagctaaagggaaccttcatcaacaccaaactgaggaagagccaccgggggttc
ggcttcaccgttgtcgggggcgacgagcctgatgagtttcttcagatcaagagtctggtt
ctggacgggcctgctgccctcgacggcaagatggagacaggtgacgtgatcgtgagtgtc
aatgacacatgcgtgctaggctacacccatgcccaggtggtgaaggtcttccagtccatc
catattggctccatggtcaacctggagctgtgccgcggctacccccttccttttgaccca
gacgaccccaacaccagcatggtgacctccgtggccatcgtggacaaggagcccatcatc
gtcaatggccaggatagctacgactccccatccagccacggcagccatactgggggcccc
gttaatggcatgagggagtcgagaccacacagtccctcctccgccgaggtggcgtccaac
agctcgcacggttacctcagcgactctgtgacgctggcgtcatccatagcgacgcagccg
gagctgatcacagtgcacatggagaagggagacaaaggctttgggttcaccatcgcagac
agccctgcagggggaggacagagggtcaaacagatagtggactacccccgctgcaggggc
ctgaaggagggggacattatcgtagaggtgaacaagaggaacgtacagagcatgagccac
aaccaagtggtggacctgctcagcaagtgccccaaaggaagtgaggtcagcatgctggtg
cagagaggcggaggggtggttcctgcaaagaagagtccaaggctgcagttagcgaggaag
gacagtcagaacagttctgtgtccagccaccggagtacccacactgactcccctgtgcac
acgtccctggccccccctctcagcaagagtaccgcccccccacccccttcccagcccctg
cccggcctgcctccccaggacccccaggcagacgggaccattcacaggaaaccagacccc
ttcaagatctgggcccagtccaggagcatgtatgaaagtaggctgcctgacttccaggag
caggacatcttcctgtggagaaaggacacgggctacgggttcaggatcctgggagggaac
gagccaggagaaccgatctacatagggcacatagtgaagtatggggcggcagatgaggat
ggacgcctgcgttcaggggatgagctcatctgtgtggacggcacggcagtgatgggcaag
tctcaccagctggtggtacagctgatgcagcaggccgccaagcagggtcacgtcaacctc
actgtgcgacgcaagaccggctacggagtgtctaaaggggagggcgaggtgcccccgtcc
ccagcctcgtcacaccacagcagcacccaggccccctccttgactgaggggaagcggacc
ccccagggcagtcagaactccctcaacacggtcagctctggcagcggctccggcagcggc
tccaccagcggcatcggcagtgggggcggcgggggctcagggagtgctgtggtcaacacc
gccctgcagccctacgacgtggagatccaccgcggggagaacgagggctttggattcgtc
atcgtctcctccgtttcccgacctgagtctggcaccacctttgctggaaatgcatgtgtg
gccatgccccacaaaatagggcgtattatcgaggggagccctgcggaccgctgtgggaag
ctgaaggtgggagaccgtatcctggccgtcaacggctgctccatcaccaacaagtcccac
tcggacatcgtcaacctgatcaaggaggccgggaacaccgtcacgctaaggatcattccc
ggagacgactcctctaatgcatcactactgaccaacgctgagaagatcgccactataaca
accactcacacgccccagcaacaggctgcacctgaacccagaaacaacaccaaaccaaaa
caggagtcctcttttgagttcaaatcccctcaggcccctcctccccccgccccaacaaca
caacctccagcccaggatgctgcgttctacgcagtggacttggagagggagaacaaaggt
tttgggttcagcctgcgaggaggtcacgagtacaacatggacctgtatgtgctgaggcta
gccgaggacggagcggccatacgcaacggcaacatgagtgtgggagatgagatcctggag
atcaacggtgagagcaccaagggcatgaagcatgcccgcgccatagaactgataaaagat
ggtggccgtcacgcccacctggtcctcaagaggggtgacggctcagtgcctgaatatgac
cccagcatcgacggtgccggcccagccgcaggggtacaaaacgcttcggaagtgagcact
ctgccgccccacaacaacacaccatcggacaccaacacatcagaccctcacaaaccatca
cggagcaaggacaagaagggccaccaccattccaaacacagacaccgctccccggacaag
aagagcaagagcaagggaggggagtctggggagacaggggcctcctccaatcagtccaag
agaaagggcgacaagagcaagaggtctggtggggataaccacggcactcaccaacaccac
aacaacagtagcggccaccgccaccggagacaccgctcccctgataagggtcgtagccgg
gcccgcagcgcagagaaaaccctggacagtagacaaagccaagggcacagagagagggaa
ggccgctctcctgaccggcaccacacccaccgccagcgctctccctacaggtcccctcgg
cgcaatcggtcaccctatggccaccgctctccctatggtcaccggtcaccctatggtcac
cggtcaccctaccactcacgccaccactctcccacccgctaccaccgcacccaatcatca
gacccctaccggcagccctccccatacagactaaggggccgggagccagagaggcccaac
ggggggatggcaccagtgcttaggaagccacctggccctgtgcccaacccctatcgtgag
gagagtgtgctgagggtgcctccagccctggaccggctcaacagggaggccacgctgctg
cgggagcctccagccctggaccggctcaacagggaggccatgctgctgagggaatccagg
gaggagcgcctgtttgaggaggatagccttctgctgagggcatccaccctggagcgtgat
tacagaggagatggcctgttatctgctgctgcccgtggccagagaggagagaccatgccc
agggtccatacccccgagtccgacagcgcttacaagcggtacagctcactgttgaggggc
cgctcgcctgagagggtggagagagaggcacgctacgcccccagagaggagtccccagac
ccccgctacagagttcagagtctgggccgaaacatctcacctgtcaggagcttcatagag
ctggaggaggagggagcaacagcacccaggctgaaggagtcttacagcacactcaagtct
gacatcagccgtgcttccaaagcgcccccggagcccaagcggaaggcttacaaagacagc
cccaaagatctgagcatctga
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integrated database retrieval system
