Oncorhynchus nerka (sockeye salmon): 115143334
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Entry
115143334 CDS
T07952
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1-like
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00510
N-Glycan biosynthesis
one00513
Various types of N-glycan biosynthesis
one01100
Metabolic pathways
one04141
Protein processing in endoplasmic reticulum
Module
one_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
115143334
00513 Various types of N-glycan biosynthesis
115143334
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115143334
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Gene cluster
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Motif
Pfam:
Ribophorin_I
Motif
Other DBs
NCBI-GeneID:
115143334
NCBI-ProteinID:
XP_029539502
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Position
LG15:complement(45248305..45254827)
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AA seq
602 aa
AA seq
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MARSIPFCTVPTCLLLITGLCYRVVADGLVNEEVKRTVDLSTHIAKITAEILLLNQGDSA
VHSFILAVEPELAPNLAYVGASVKGDEEEDGILELKQTMIQGQSGEFYKVQLPSSLAVGA
KLRVKVETVLSHILRPFPTHITQAERQLVVFQGNHYLYSPYPTRSQTTHVRLASKTVESY
TKLGNPSKSDEAIEYGPFRDVAPFSEDALKVHYENNTPFLTISSITRIIEVSHWGNIAVE
ETIDMRHTGAFLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHL
QILEDSVEVEVRPRFPLFGGWKTHYIIGYNLPSYEYLYTLGDQYALKMRLVDHVYDDQVI
DSLTVKLILPEGARNIHVETPYPIDRIPDQLHYTYLDTFGRPVLVASKNNLVEQHIQDVV
VHYTFNKVLMLQEPLLVVGAFYILFFTVIIYVRLDFSITKDPAAEVRMKVSSITEQVLTL
VNKRLGLYRHMDEVVNRYKQSRDTGALNSGRKILEADHRTLTNDISSLQARLKAEGSDLA
DKVGEVQKLDGQVKELVCRSWQEAERLVAGKVKKEAYIDNEKTLSSKRLELVTRIDSLLD
TL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgaagcatacctttctgcacagttcccacttgtctgcttcttatcaccggactg
tgttatcgagtagttgccgacgggctggtgaacgaggaggtgaaacgaacagtggacctg
agcacgcacattgctaagataacagcagagattcttctgttaaaccagggagactcggcg
gtacatagctttatattggcagtagagcccgaattggcccccaaccttgcgtacgtcggg
gcatcggtgaagggtgatgaagaggaggatgggatacttgagctcaagcagacaatgatc
caaggccaaagtggggagttctacaaggtgcagttaccctccagtctggccgttggcgca
aagctgcgagtgaaggtggagacagtcctgagccacattctgaggccctttcccacccac
atcacccaggctgagcgtcagctggtggtgttccagggcaaccactacctgtactctcca
taccccacccgcagccagaccacccatgtccgccttgcctctaagacggtggagagctac
accaagctgggcaaccccagcaagagtgatgaggccattgagtacggccccttccgtgat
gtcgccccattcagtgaggatgccctgaaggtccattatgagaacaacacccccttcctc
actattagcagcatcacccgcatcattgaagtttctcattggggaaacattgctgtggaa
gagacaattgacatgaggcacacaggggcattcctgaaagggcctttctcccgttatgac
taccagcgccagtctgacagtggcatctcatcagtcaaatcctttaagaccatccttcct
gcctcagcccaggatgtgtactaccgggatgagatcggcaacatctccacctcccacctc
cagattctggaagactctgtggaggtggaggttaggccccgattccccctgtttggtggc
tggaaaacccactacattatcggctacaatctgcccagctacgagtacctctacaccctg
ggggatcagtacgctctgaagatgaggctggttgaccatgtatatgatgaccaggtcatc
gactccctcactgttaaactcatactgccagaaggcgccaggaacatccatgtggaaacc
ccctaccccattgaccgtattccagaccagctgcactacacttacctagacacctttggc
cgccccgtgctggtggcgtctaaaaacaacctggtggagcagcacatccaggacgtagtg
gtgcattataccttcaataaggtcctgatgctgcaggagccccttttggtggtgggggca
ttctacatcctcttcttcactgtcatcatctatgtgcgcctggacttctccatcactaag
gaccctgctgcagaggttcgtatgaaggtgtcctcaatcacagagcaggtcctgaccctg
gtcaacaagcgtttagggctctaccgccacatggacgaggtggtgaatcgctataagcaa
tctcgagacacaggggccctgaacagcggccgcaagatcctggaggccgaccaccgcacc
ctcaccaacgacatcagctccctgcaggcccgcctcaaagcagagggctccgaccttgca
gataaggtgggtgaggtgcagaagctggacggccaggtgaaggagctggtgtgtcgctct
tggcaggaggctgagcgcctggtggcaggcaaggttaagaaggaggcctacatcgacaac
gagaagaccctctctagcaagagactggagctggtgacccgcatcgacagtctgctggac
accctgtaa
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