KEGG   Oncorhynchus nerka (sockeye salmon): 115143336
Entry
115143336         CDS       T07952                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04137  Mitophagy - animal
one04140  Autophagy - animal
one04144  Endocytosis
one04145  Phagosome
one04148  Efferocytosis
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115143336
   04145 Phagosome
    115143336
   04140 Autophagy - animal
    115143336
   04137 Mitophagy - animal
    115143336
   04148 Efferocytosis
    115143336
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115143336
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115143336
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115143336
   04031 GTP-binding proteins [BR:one04031]
    115143336
Membrane trafficking [BR:one04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    115143336
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115143336
  Exosomal proteins of other body fluids (saliva and urine)
   115143336
  Exosomal proteins of colorectal cancer cells
   115143336
  Exosomal proteins of bladder cancer cells
   115143336
GTP-binding proteins [BR:one04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    115143336
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 AAA_7 NTPase_1 AAA_22 AAA_24 G-alpha AAA_5 ATPase_2 NACHT NB-ARC AAA_14 SRPRB ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 115143336
NCBI-ProteinID: XP_029539503
LinkDB
Position
LG15:45269583..45281947
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERAKPSAEACSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacgtctaggaagaaagtactactcaaagtcatcatcctgggagactctggagttggg
aagacgtcgctgatgaaccagtatgtgaataagaagttcagtaaccagtacaaagccaca
ataggagctgatttcctaacgaaagaagtgatggtggatgacagacttgtcaccatgcag
atctgggacactgcagggcaggagaggttccagtctctgggtgtagcgttctaccgcggg
gcagactgctgtgtgctggtgtttgacgtgactgcccccaacacctttaagacgctagac
agctggagggacgagttccttatacaggccagcccccgagatcccgagaacttccccttt
gtggtgctaggcaacaagattgacttggagaacagacaggtgacgaccaaacgagcacag
gcgtggtgtcagagcaagaacaacatcccctacttcgagaccagcgctaaggaggccatc
aacgttgaacaggctttccagactatcgcacgcaatgctcttaaacaggagacagaggta
gagttgtacaatgagtttcctgaaccgataaagctggacaggaacgaacgggccaagcca
tcagcggaggcctgcagctgctga

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