KEGG   Oncorhynchus nerka (sockeye salmon): 115143366
Entry
115143366         CDS       T07952                                 
Name
(RefSeq) WD repeat-containing protein 1-like
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:one04990]
    115143366
Domain-containing proteins not elsewhere classified [BR:one04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   115143366
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C eIF2A Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 PEP5_VPS11_N RMC1_N NBCH_WD40 Beta-prop_NUP159_NUP214 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_1st PROPPIN Beta-prop_ELP1_1st Beta-prop_WDR11_1st DUF5711 Beta-prop_DCAF12 WD40_RFWD3 DUF7165 HPS3_N PQQ
Other DBs
NCBI-GeneID: 115143366
NCBI-ProteinID: XP_029539574
LinkDB
Position
LG2:54448129..54463018
AA seq 606 aa
MTYDLKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKIINSVDIKQTRPYRLITGSDDNCGAFFEGPPFK
FKFSSTDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKLGALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSMALTTFNMGADVMDQQLGCLWQKDHLLSISLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNKGRAYIYSGSHDGHINYWDAETGENNCFS
GKGHSNLVTKMAVDEADQLVTCSMDDTVRFTSVTKKEYSASNLVKMDVQPKHVSVATGGL
TLAVCIGQVVLLKDQKKVFMLDSLDYEPEAGAIHPGGSTAAVGGADGKVHLYSVQGNTLK
DEGKSMEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADDYSVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASIK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgacctatgatttgaagcatgtatttgccagcctcccgcagatggaacgaggagttgcc
aaagtccttggtggagatcccaaaggcaacaacttcctctacaccaatgggaagagtgtc
atcatcaggaacatagataaccctgccatagctgacatctacaccgagcaccctcatcaa
gttactgttgccaagtatgctcccagtggcttctacattgcgtctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggagcaccttctgaagtacgagtaccagcct
tttgggggcaaaatcaaggacatcgcctggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagtttggggctgtgttcctgtgggacactggctcctcagtgggt
gagatctcgggccactccaaaatcatcaacagcgtggacatcaagcagactcgcccctac
cgcctcatcaccggtagtgatgacaactgtggggccttctttgagggaccccctttcaag
ttcaagttctcaagcaccgaccacagccggtttgtcaactgcgtgcgtttctctccagac
gggaaccgcttctgtactgctggcgctgacggtcagatcttcctatatgacggaaagact
ggcgagaagcttggggctctgggcggagcaaaggcccatgaaggaggagtctatgccgtg
agctggagccctgacagctcccagctcatctctgcctcgggtgacaagactgtgaagctg
tgggatgtgggcaccagcatggccctcaccaccttcaacatgggtgccgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccacctgctcagcatatccctgtcgggctac
atcaactacctggataagagcaaccccgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgacagttcacaaaaacaagggtagggcttacatctactctggc
agccatgacgggcacatcaattactgggatgccgagaccggggagaacaactgcttctca
gggaagggccacagcaaccttgtcacaaagatggcggtggacgaggccgaccagctggtg
acttgcagcatggatgacactgtccgcttcaccagcgtgacaaagaaagaatacagtgct
tccaacctggtaaagatggatgtccagcctaaacatgtttccgtagcaacaggggggctc
acattggcagtgtgcattggacaggtggtgttgctgaaggaccagaagaaggtgttcatg
ctggacagtctggactacgagcctgaagcaggagccatccacccaggaggcagcactgcg
gcagtgggcggcgcagatgggaaggtccacttgtattctgtccaaggcaacactctgaag
gatgaggggaagagcatggaggccaaagggccagtcacagacatggcctactccaaagac
ggagcctacctggccgtcactgatgagaagaaggtcgtcacagttttcaccgtggccgat
gattactcggtcaaaaatgatttttatggacaccacgctaaagtagttaccttggcctgg
tcccccgacaatgagcactttgccagcggtggaatggacatgatggtctatgtttggaca
gtgaatgatgcagacaagaggctgaagatcccagatgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgaacacacgctagtgaccacctctcatgacgccagcatcaag
cagtggactcttaaattctga

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