Oncorhynchus nerka (sockeye salmon): 115143368
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Entry
115143368 CDS
T07952
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD-like
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04217
Necroptosis
one04622
RIG-I-like receptor signaling pathway
one04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115143368
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115143368
04625 C-type lectin receptor signaling pathway
115143368
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115143368
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115143368
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115143368
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C67
115143368
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115143368
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
DZR_2
zf-HIT
Motif
Other DBs
NCBI-GeneID:
115143368
NCBI-ProteinID:
XP_029539575
LinkDB
All DBs
Position
LG15:47057816..47067162
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AA seq
745 aa
AA seq
DB search
MCVELRSNCSSNTWKNGWLLVTQRLYCLSAGILHFRRGMDSKREGKDKFFIVTRGKARKG
FARGCIGRVEAEMQKGELMGLLYGGGSSGGNPKSGGMVKMEDTYPLTCHQAQLLLFVSPS
SKRLELLCNPQLFLAICVLSQDDLVVVKHKKGHQPGLVKNLMLIGKKENQGDLLMLGFEV
EFVQDSNQTVSSKKPAPLPLFSAADIVQVVPAYSVGLGPSWKDSHSEGLNRKAGSRINSM
PNMGSCGRQVRDINHVDQSVTPPESLSHHTFDVGSLVEVTSNTGITVYGVIQWMGVLSEN
KTDWAGIELDYEVNNCSDGTYGGQRYFTCKGGRALFLPLTKCSPDGRFLCLCSGKETFKA
TNILPVTPLEETDENVPPIPESEALSLLVGKMKGIQGHYNSCYLDATLFSLFSSSMTLDS
VCHKPADTEQSISRSLRRDIVNCLRRQGFVPAESVMNFRKQLGCDTFVTEEKDPEEFITI
LIQRVLCIEPLLKLRSNNNTSQDAYTFQIILDKEQVTQTPTVQQLLDTSFLSCGLKFEEI
PSCLMVQMPRFGKKYKMFPHIIPSTELDITDLLYNSPRECFLCGRLAEYECPQCLQDRKL
QPGRVKQYCTTCKTQVHTHPSRKGHCPRALAVPAEVPADAPLPRHMMQLFAVLCIHTSHY
VSFVKYGPGPRSWLFFDSMADRCGDDHSGYNIPEIRACPEVGDFLSQSEEELVWADPSQA
GEPVRRLLCDSYMCLYQSASMALYR
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtagaacttcggagtaactgctcttcaaatacttggaaaaacgggtggcttcta
gtcacacaacgtctgtattgcttgtcagcaggaatattgcactttagaagagggatggat
tcaaaaagagaagggaaggacaagttcttcatagtgacacgggggaaggcgagaaaaggt
tttgcaagaggatgtatcggccgtgtggaggcagagatgcagaagggagagctgatggga
ctgttgtacggaggtggcagcagtgggggtaaccctaagagtgggggcatggtgaagatg
gaggacacataccccctcacctgtcaccaggcccagctgctgctcttcgtgtccccctcc
agcaaacgcctggagctcctgtgtaacccccagctttttttggctatctgtgtgctgtct
caggatgacctggtggtagttaagcacaagaagggtcaccaaccagggctggttaagaac
ctaatgctgatcggtaagaaggagaaccaaggagacctgctgatgctgggctttgaggtt
gagtttgtgcaagactctaatcaaacagtgtcatctaagaagcccgcccctcttcccctg
ttcagtgcagcagacattgtccaggttgtcccagcgtactctgtaggccttggccctagc
tggaaagacagtcattcagagggtcttaacagaaaagcggggtcacgtatcaactccatg
cctaatatgggatcttgtggacgacaagtgagagatataaaccacgtagaccagagtgtc
accccacccgaaagcctgtcacaccacacttttgatgtgggatccctggtggaggtaacg
tccaacactgggatcactgtatatggggtaatccagtggatgggagtcctttcagaaaat
aaaactgactgggcaggaattgagctggattatgaggtgaataattgctcagatgggacg
tatggaggccagcggtatttcacttgtaaagggggcagggccctatttttgcccctaaca
aagtgcagtccagatggaaggttcctatgtctctgctctggaaaggagaccttcaaagcc
acaaatatcctcccagttactccattggaggaaaccgatgagaatgtccctcctatccct
gagtcggaagccttgtctttgctcgtgggcaagatgaaggggatccaggggcactacaac
tcctgctacctcgatgccactctcttcagtctgttcagctcatccatgaccctggacagt
gtttgccacaaaccagctgacacagaacagagcatatctcgctctctgaggagagacatc
gttaactgtttgcgccgacaaggttttgtgcctgctgagagcgtaatgaacttccgcaaa
caactcggctgtgacacctttgtaacagaagagaaagaccctgaagagttcatcacaatc
cttatacagcgggtgctgtgcatagagccattgcttaaactcagatcgaataacaacaca
tctcaggatgcctacacattccagattattctggataaggagcaggtgacacagactccc
acggttcagcagctgctggatacctccttcctgtcttgtggcctcaagtttgaggagatc
ccatcctgtctcatggtccagatgccaaggtttgggaaaaagtacaagatgttcccccac
atcatcccttcaacagagcttgacatcacagatcttctgtacaactccccccgagagtgc
ttcctctgtgggcgtttggcagagtatgagtgccctcagtgcctacaggaccgcaagctc
cagccaggaagagtcaaacagtactgcactacttgcaagacacaggtgcacactcatccg
tctcggaagggccactgccctagagccctggcagtgccagcggaggttccggcagatgcc
cctttacccaggcacatgatgcagttgttcgctgtgctctgcatccacaccagccactat
gtgtcttttgtgaagtatgggcctggccctcgctcctggctcttcttcgacagcatggcg
gacagatgtggtgatgaccacagtggctacaacattccagagatcagggcttgtcctgag
gtgggtgacttcctgtctcagtcagaggaggagctagtgtgggctgacccctcccaggct
ggagagcctgtccgcaggctgctgtgtgactcctacatgtgtttgtaccagagcgcatcc
atggccctctacagataa
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