Oncorhynchus nerka (sockeye salmon): 115143380
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Entry
115143380 CDS
T07952
Name
(RefSeq) red-sensitive opsin-2-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
one04030
]
115143380
G protein-coupled receptors [BR:
one04030
]
Rhodopsin family
Vision
Opsin
115143380
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
TctB
7tm_4
Motif
Other DBs
NCBI-GeneID:
115143380
NCBI-ProteinID:
XP_029539597
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Position
LG15:47294507..47298716
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AA seq
353 aa
AA seq
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MAELGVLAARRHDDTTRESGFAYTNSNNTKDPFEGPNYHIAPRWVYNLSTLWMIFVVITS
VFTNGLVLVATAKFKKLQHPLNWILVNLAIADIGETLLASTISVCNQIFGYFILGHPMCV
FEGYTVSVCGIAALWSLAVISWERWVVVCKPFGNVKFDAKWAMGGIIFSWVWAAFWCAPP
IFGWSRYWPHGLKTSCGPDVFGGNEDPGVKSYMITLMITCCFFPLFVIIFCYIFVWLAIR
AVAAQQKDSESTQKAEKEVSRMVVVMIIAFCVCWGPYTCFACFAAANPGYAFHPLAAALP
AYFAKSATIYNPVIYVFMNKQFRSCIMQLFGKAEDDASEVSTSKTEVSTVAPA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcagagctaggagtgttagctgccaggcggcacgacgatacaacgagagaatcaggt
ttcgcctacaccaacagcaataacaccaaagatccttttgagggccccaactaccacatt
gctccaagatgggtgtacaatctctcaacactttggatgatctttgtggtcattacctca
gtcttcaccaatggcctggtactggtggccactgcaaaattcaagaagctccaacaccct
ctgaactggatcttggtcaaccttgctattgctgacattggagaaacacttttggcaagc
accatcagcgtttgcaaccagatttttggctactttattctgggacatccaatgtgtgtc
tttgagggatacactgtgtctgtgtgtggaattgctgctctgtggtccctggctgtcatc
tcttgggagagatgggtggtggtgtgcaagccatttggaaatgtcaagtttgatgccaaa
tgggccatgggaggcattatcttctcctgggtctgggctgctttctggtgtgcccccccc
atctttggctggagcaggtactggcctcacggcctgaagacttcctgcggacctgatgtg
ttcggaggcaatgaggatcctggagtcaaatcctacatgatcactctcatgattacatgc
tgcttcttccccctgttcgtgatcatcttctgctacattttcgtgtggctagcaattcgt
gctgttgctgcgcagcagaaagactctgagtcaacacagaaggcagagaaagaagtgtcc
aggatggttgttgtcatgattatagctttctgtgtgtgctggggaccttatacctgcttt
gcctgctttgctgcggctaaccctgggtatgccttccaccctctggctgctgcactgcct
gcctactttgccaagagcgccaccatctacaatccagttatctatgtcttcatgaacaaa
cagttccgttcttgcatcatgcagctctttggcaaggcggaagatgatgcctctgaagtg
tctacatcaaaaacagaggtttccactgtggcacctgcataa
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