Oncorhynchus nerka (sockeye salmon): 115143393
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Entry
115143393 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115143393
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
115143393
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Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
Oscp1
DUF6809
Motif
Other DBs
NCBI-GeneID:
115143393
NCBI-ProteinID:
XP_029539626
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Position
LG15:complement(47999322..48003104)
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AA seq
405 aa
AA seq
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MERITSAQPPPCMAKHQSREMADMQGKDFPKYVCKHRKGMKRVEDSKETCKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALSTLLEQQQQKIIALQI
RDQSSVSSENSEEMFHSGFHVCAKEVLQYLANQGSSRDPLTPSEMTSHLHKVASEVLQGP
FSPRSEEPTHKPIDSMEKPAGQMPKVKEGHPKNFVSVIQRTYPHGHGEQSGNDTDTDSGY
GGEHEKRDLKAQRSSYYSKEGELKYALAERMAGGGVKQEGAEPQAKRFKSDYSEDESSSG
QVVSSHHSYISFSQHQTPLCVPFYLIPQAAASWPMMEKCWFPRGMPILYPGMNVSAVSLS
PEKIPQNLVMSPRAGSPTLYQAPMDSPALLQALKQAPXMNLESKD
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattacaagtgcgcaacctcctccttgtatggcaaaacaccagtcgcgggag
atggcagacatgcaaggaaaagatttcccaaagtacgtgtgcaaacaccgaaagggaatg
aagcgcgtggaagacagtaaggagacatgcaagttaccccaccgattgattgagaagaaa
agacgtgacagaatcaatgaatgcattgcccaactgaaggatttattgccagaacatctc
aaactcacaactctgggccatttggagaaagctgtggtgttggaactcaccctgaagcat
gtgaaagccctgagcactctcctggaacagcagcagcagaaaatcattgcattgcaaatc
agggatcagagcagtgttagctcagagaacagtgaggagatgttccactctggcttccat
gtctgtgctaaggaggtcctccagtacctggctaaccaggggagcagcagagaccccctg
accccctctgaaatgaccagccacctccacaaagtagcatcagaggtgctccagggtcca
ttcagtccccggtccgaagagcccacccacaaacccatcgatagcatggagaagcctgct
ggtcagatgcctaaggtcaaggagggtcaccccaagaactttgtgtctgtcattcaaagg
acatacccccacggacatggagagcagagtggcaatgacacagacactgacagcggctat
ggaggggaacacgagaaacgggacctcaaagcccaacgctcaagctactacagcaaggag
ggggagctcaaatatgctctggctgagaggatggcaggaggtggcgtcaagcaggagggt
gctgagccccaggccaagaggttcaaatctgactactcagaggacgagtcttcctctggg
caggtggttagcagccatcacagctacataagcttctcccaacaccagacccccctctgc
gtacccttctacctcatcccccaagcagctgcatcgtggcccatgatggagaagtgctgg
ttcccacggggcatgcccattttgtacccgggcatgaatgtctcagcagtcagcttgtct
ccagagaaaatacctcaaaacttagtaatgtctcccagggcaggttccccgacactctac
caagcacccatggactcaccagccctccttcaagctttaaaacaagcccccngcatgaat
ttggaatccaaagactga
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