Oncorhynchus nerka (sockeye salmon): 115143396
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Entry
115143396 CDS
T07952
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115143396
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115143396
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_9
Ig_3
LRR_1
ig
LRR_EndoS
Ig_2
V-set
fn3
Pur_ac_phosph_N
LRRNT
LRRCT
LRR_Zer-1
Squash
Sp38
Motif
Other DBs
NCBI-GeneID:
115143396
NCBI-ProteinID:
XP_029539638
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All DBs
Position
LG15:complement(48217022..48228116)
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AA seq
720 aa
AA seq
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MARGRFIYCLLGQLFTGLILFSVGLSSIQRDNDCPQQCVCEIRPWFTPQSTYREATTVDC
NDLRLTRIPGNLSSDTQVLLLQSNYIARTSEELEQLYNLTELDLSQNNFSSIRDVGLSNM
SQLTTLHLEENQITEMPDYCLQDLSNLQELYINHNQINIISPNALSGLHNLLRLHLNSNK
LKAINSRWFESTPNLEILMIGENPIVGILEFNFKPLVNLRSLVLAGMDLTDIPGNAFVGL
DNLESLSFYDNKLVRVPQNALQKLPNLKFLDLNKNPVHKIQEGDLKNMLRLKELGINNMG
ELACIDRFALDNLPELTKLEATNNPKFSYVNRQAFRDLPALESLMLNNNALNALYQSTVD
FLPNLREISIHSNPMRCDCVIQWMSSNKTSIRFMEPLSMLCAMPAKVRGQHVREVLQQDS
AEQCLPMISHDTFPNHLNLDIGMTVDLDCRAMSQPEPEIYWVTPIGNKVMIDTMSEKYSL
SSEGTLRISHIQVEDSGRYTCVAQNVEGADTRVTAVRVNGTLLDSTQLMKIYVKQTESHS
ILVSWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPATKYEVCLTV
SNIHQQTQKSCVNVTTKHAAFAVEISDQGTNTALAAVMGTIFGIISLASMAVYIAKRWKR
KNYNHSLKKYMQKTSSIPLNELYPPLINLWEVDSEKDKEVSSSSETKPSQVDTTQSYYMW
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggctagagggaggtttatctactgtctactaggccagttgttcactggcctgattctg
ttttccgttggactatcctcaatccagagagataatgattgtccccagcagtgtgtatgc
gagatccgaccctggttcacccctcagtccacctacagagaagccacgacggtggactgc
aacgatctccgtctcacacgcatcccaggcaacctgtccagtgacacgcaggtgctcctc
ctgcagagcaactacatcgccaggaccagtgaggaactggagcagctatacaacctgaca
gagttggacctgtctcagaacaacttcagcagcatccgtgacgtgggcctcagcaacatg
tcccagctcaccaccctgcacctggaggagaaccagatcactgagatgcctgactactgc
ctgcaggacctcagcaacctgcaagagctctacatcaaccataaccagatcaacattatc
tcccccaatgccctctctggcctgcacaacctgctcaggctccatctaaactctaacaag
ctcaaggccatcaacagccgctggtttgagtctactcccaatctggagatcctcatgatc
ggggaaaaccctatagttggcattctggagtttaacttcaagcctcttgtaaacctgaga
agcttggttctggctggaatggatttaacagacattcctggaaatgcctttgtgggacta
gataacctagagagtctctccttctacgacaataagctagtcagagttcctcaaaacgct
cttcagaaactacctaacctcaagttcttggacttgaacaaaaaccctgtgcacaaaatt
caagagggggacttgaagaacatgctgaggctgaaagagctgggcattaacaacatgggg
gagctggcctgcattgaccgctttgccctcgataacctccctgagctcaccaagctggaa
gccactaacaaccccaagttctcctacgtgaaccgccaggccttccgtgacctccccgcc
ttggagagtctcatgttgaacaacaacgcccttaacgccctctaccagtccactgtggac
ttcctgcccaacctgcgtgagatcagtatccacagcaaccccatgcgatgcgactgcgtc
atccagtggatgagctccaacaagaccagcatccgcttcatggagcccctctccatgctc
tgtgccatgccagccaaggtcagagggcagcatgtgagggaggtgctccagcaggactca
gcagagcagtgcctgccgatgatctcccacgacacatttcccaaccacctgaacctggac
atcggcatgactgtggatctggactgccgagccatgtcccagcccgaaccggagatctac
tgggtcacgcccattgggaacaaggtgatgatagacaccatgtctgagaagtacagcctc
agtagtgaaggaacgctgcgcatctctcacatccaggtagaggactctggcaggtacacc
tgtgtggcacaaaatgttgagggggcagacactcgggtgactgctgttagggtgaatggt
actctcttagacagcacccagctgatgaagatctatgtgaagcagactgagtcccactct
atcctagtctcctggaaggtcaactccaatgtcatgacctccaacctcaagtggtcatct
gccaccatgaagatagacaacccccacatcacctacacagccagggtcccggtggatgtc
catgagtataacctcacacacctacagcctgccaccaagtatgaggtgtgtctcactgtc
tccaacatccaccagcagacgcagaagtcctgtgtcaacgtcacaacgaagcatgcagcc
tttgctgtggagatatccgaccaaggcactaacactgctctcgcagctgtcatgggaacc
atattcggcatcatcagcctggcctctatggctgtgtacattgccaagaggtggaagagg
aaaaactacaatcactccctgaaaaagtacatgcagaaaacatcctccatcccactcaat
gagctctaccctcccctcatcaacctgtgggaggtagacagtgagaaggacaaagaggtg
tcctcctcctcagagaccaaacccagccaagtggacactacacagagctactatatgtgg
tga
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