Oncorhynchus nerka (sockeye salmon): 115143410
Help
Entry
115143410 CDS
T07952
Name
(RefSeq) contactin-3-like
KO
K06761
contactin 3/4/5/6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115143410
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
115143410
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Contactins
115143410
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
one00537
]
Others
115143410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
C2-set_2
Pur_ac_phosph_N
C2-set_3
Pox_C7_F8A
Motif
Other DBs
NCBI-GeneID:
115143410
NCBI-ProteinID:
XP_029539673
LinkDB
All DBs
Position
LG15:complement(49479387..49560602)
Genome browser
AA seq
1031 aa
AA seq
DB search
MMLLWKRLLLLSIIGCLAAHAQDVLFQGPRWRTEPSDLILPNNSPDQEATITCEAEGKPS
PQYRWSLNGTLIDLGSDYRRHMSGGNLIINSLDRDQDTGIYQCTAFNTWGIILSCRATLQ
FAYLDNFKTQTARSAVNVRESQGVVLLCGPPMHSGELTFAWIFNEYPYFVQQDSRRFISQ
ETGSLYIAKVEPSDVGNYTCVVNNSITKGKVLSFPTPLVLRNDGAMGEYEPKIEVNFPDT
VPAAKGSTVKLECFALGNPVPEISWRRTSGVPFPSKVKMKNSNAVLEIPHFQQEDTGMYE
CVAENSRGKNAARGRIAFQAKPHWLQTMIDGALSIEENLFWECKANGKPKPSYSWLRNGD
NLMAEGRVQIENGALSIAALNLSDAGMYQCVAENKHGIIYSSAELMVLASPPSFSKNPLK
PLLKARSGSEVVLECKPQASPRAISLWKKSNEIVQKNERITLLANGTLKIVNATRRDAGS
YTCIAKNQFGTASATGRLLITEPTRITQRPANMEIIVGESIVLPCQIASDPALDVSFSWE
FNGQLIDFHGDADHFDRVGGSISGDLMIRNIQLNHGGKYVCVIDTDVESLSASAILVVKG
PPGLPDTVAVEEITDSTAQLSWSPGRDNGSPITGYIIQARTPFTVGWQAVDTVPEVINGN
TLTATVVGLNAWVEYEFRVVARNSVGMGEPSPASAKTRTEDTMPDTAPTDVGGGGGTKSE
LVITWEPVPEELQNGEGFGYIIAFRPLGAITWTRVVISTPGVARYIFRNDTIPPFSPFDV
KVGAYNNRGEGPFSSIATVFSAEEVPSEAPKRVWGRSVSAATVEVIWEALPVTPERVLGY
EVVYWEDDTKPDTLGKVRTSGNYSAVNVTGLSANTQYYLAVCAFNTAGTGPQSTHINATT
KKPAPGQPPLNVEWTMIGSLLTLHWGPVIAMETEAEVIGYLVLLRRHRYNDVNSIITNKT
RMELTLSPNDNYLIQIKALSEGGEGVGSEPIHIHKLSMGARGSGASSLNPLSLSHLSAFL
ISALLLLNSSW
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgatgttactatggaaacgacttctgctgctatcaatcattggttgccttgccgctcat
gcacaagatgtcctgttccaagggccaagatggagaacagagcccagtgacctcattctc
cccaacaactcccctgaccaggaagccaccattacatgtgaggcagaggggaaaccctcc
ccacaatacagatggtcgcttaacggaacactcattgatctggggagtgactaccggcgt
cacatgtctggaggcaacctgatcattaacagtctggacagggaccaagacacagggata
taccagtgcactgccttcaacacatgggggatcatcctcagctgccgagccactctacaa
tttgcatacctagataacttcaagacccaaactgcacggagtgctgtgaatgtccgagag
agccaaggagtggttttgctatgtggaccacccatgcattctggagagctgacgtttgca
tggatcttcaatgagtacccctactttgtccagcaagatagtcgtcgattcatctcccag
gagacaggaagtctgtacatcgctaaagtggagccttctgatgtgggcaactacacctgt
gtggtcaacaatagcatcactaagggcaaagtcctcagctttcctacaccactggtcctg
aggaatgacggagcaatgggtgaatatgaaccgaaaatagaagttaatttccctgacact
gttccagctgcgaagggatccacggtaaaactagaatgcttcgcactgggaaacccagtc
ccagaaataagttggaggagaaccagcggtgtcccatttcccagtaaggtgaagatgaag
aactccaacgctgttcttgaaattccacatttccagcaggaagacacagggatgtatgag
tgcgtggcagaaaatagccgggggaaaaacgctgcacgaggtcgtatcgccttccaggca
aaaccccattggctgcaaacaatgatcgacggggccctgtccattgaggagaacctgttc
tgggagtgtaaggcaaacggaaaacccaagccctcctacagttggctgaggaatggagac
aacttaatggcagagggccgggtgcaaatcgaaaacggggctctctccatagcagcatta
aacctgtcagacgccggaatgtatcagtgtgtggctgaaaacaaacatggcattatttat
tccagcgctgagctaatggtgttagcatcacctcccagtttctccaagaatccactgaag
cccctgctgaaagctcgctcaggcagtgaagtggttctggagtgcaagccccaagcctcg
ccccgggcaattagcctgtggaagaaaagcaatgagattgtgcagaaaaacgagaggatt
actctgcttgccaacgggacactgaagattgtcaacgcaaccagaagggatgcggggagc
tacacatgcatcgctaaaaatcagtttgggactgcaagcgccaccggaagactccttatc
acagagcccaccagaatcacccagaggcctgctaacatggagatcattgttggcgagagc
atcgtgctgccctgccagatagccagcgatccagccttggatgtgtctttctcctgggaa
ttcaacgggcagctcatagacttccacggggatgccgaccattttgacagagtaggaggg
agcatttcaggagatctgatgattcgtaacatccagctgaatcacggggggaaatatgtc
tgtgttatcgacaccgacgtagagagcttgtccgcttcggccatcttggttgtgaaaggt
ccccccgggctcccggacacagtagcagtggaggagatcacagatagcacggcccagctc
tcttggagccccggcagggacaacggcagtcctatcacaggctacatcatccaggcccgg
acccccttcactgtgggctggcaggctgtggacacagttcctgaggtgatcaatggcaac
acgctgacagccactgtggtgggcctgaacgcctgggtggagtatgagttcagggtggtg
gcccgcaacagtgtgggcatgggagagcccagtccagcctcagccaagaccaggacagag
gataccatgcctgatacagctcccactgatgttggaggcggaggaggcacaaaatctgaa
ttagtgataacttgggagcccgtgcctgaggaactgcagaatggagagggcttcggttac
atcatcgccttccggccactgggtgccatcacctggacacgagtggtcatctccacgccc
ggggtggcccgatacatcttccgcaacgacaccatcccgcctttctcgccgttcgatgtg
aaggttggggcgtacaacaaccgtggggaaggccccttcagttccatagccacagtgttc
tcagcagaggaagtccccagtgaggctcctaagagggtttggggcaggagtgtatctgca
gctacagttgaagtgatttgggaagccctccccgtcacccctgaaagagtgctgggttat
gaggtggtgtactgggaagatgacaccaagcctgacacattaggcaaagtcagaacctct
ggaaactactcggcggttaatgtgactggactgagcgctaacacacagtattatctagct
gtgtgcgcctttaacactgcagggacagggccacagtctacacacatcaacgccaccacc
aagaagccagcaccaggccagcctcctttgaatgtagagtggaccatgattggctctctg
ctcactctacactggggtcctgtgatagccatggagacagaggcagaggtcatcggatat
cttgtgctgttgagaagacaccggtacaatgacgtaaacagcatcataacaaacaaaacc
aggatggagctgacgctgtctcccaacgacaactacctgatccagatcaaggccctgagt
gagggtggtgaaggtgtaggcagcgaacccatccacatccacaaattaagcatgggcgca
cgaggttcgggagcatctagtctcaatccgctatctctgtctcatctctccgcattcctc
atcagcgctctcctcctcctcaactcctcctggtga
DBGET
integrated database retrieval system
