Oncorhynchus nerka (sockeye salmon): 115143411
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Entry
115143411 CDS
T07952
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115143411
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
L1 family
115143411
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
Bravo_FIGEY
V-set
Ig_5
C2-set_2
Ig_PDGFR_d4
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
115143411
NCBI-ProteinID:
XP_029539674
LinkDB
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Position
LG15:49628508..49723989
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AA seq
1175 aa
AA seq
DB search
MRMRSSRWSPGLALLVGVVASICAFHPTTAIDIPLEVVGHVNIEQLPTITEASPSSLIAF
PFDESFPMTCEAKGNPKPEFWWTKNGEEFDPYQDPRLIKEKNSGTFVIPNTGNLTEYQGT
YRCYASNKLGTAITEEVEFVVPHVPKFPKEKIDPIEVEEGQPVILECNPPKGIPPLQIYW
MTIGLQHIEQDDRVSMGLNGDLFFSNALEKDSHRDYCCFAAFPKIRTIVQKNAMSVIVKS
KNSNNDSSSGPGHANSIMERKPSLLMPSGVKSETQLVKGDELLLECIAEGFPTPMIEWLK
IDHMLPDRVTIENHGKLLSIDQVDEDDNGKYMCKATNIHGMAVHYFDVSVEEPPQWVSEP
ESQLRMIGSDVLINCSATGTPQPTIQWMVNGKPIEEVPASNRKEFDGKMVLHKANSTDSA
VYQCEASNRHGTLLANVNIMIMNLPPMILTEEGLEYSAVEGKVIVMHCKVFSSPPSAITW
NKEDSPGSLEGPRFTVHQNGSLEIYNVEKEDMGQYTCYTKNTEGTSAITALLDVKDPTKI
FQAPEDLQVLIGTTAQLSCLAVYDNSFSGDFEIVWEKDDVEIALNHTENSGYFVEDGILQ
IVNVSHRDQGMYKCVASTPMDQDTASALLMVLDIPHAPENLVLSEHKGRSVKLKWIPGED
HNSSTTEFIIEYEESQWEPGTWRELQRVPGNHGSAVLKLYGHVNYRFRVSGVNIVGRGRP
SEPTERYKTPPAAPDKNPENIKIEGHLPHEMDINWEPLSPIEHNGPGLEYKVSYKRQHVA
EDWQEHVVKRHSFVVKDTPTFVPYEIRIQARNHHGWGPEPKVVTGYSGEDFPSAAPDDVA
VEVMNNSLVKVSWMRVHKDKLHGHLGGYRISWWRLRSLLDSKKTHGDKHTLTFPGDRNHA
MVPGLTPFSEYSLIIMTFNRRGNGPGSHAVNFKTPEGVPEKTPVFRVTDVQKHTVTLTWA
PPLEANGVLTGYLLEYQLINDTEEVGVLQTVDISNPDTTMWVLQNLEAISRYKFYLRPCT
RVGCGPRVSKESTTTPEARLASIQGGISTQGWFIGLMCVAALLTLMVLIACFVNRNKGGR
YSVKEKEDLHPDLESQGIHDDTFCEYSDNDEKPLKGSQHSLSGQIKAEDSGDSLVDYGDE
DIQFNEDGSFIGEYAGRKEKKVSMEVKGTTNQSTA
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgaggtcgtcgaggtggagcccaggattggctctcctggtcggtgtggtcgcc
agtatctgtgcctttcaccccaccactgccatagacataccactggaggttgtaggtcat
gtaaacattgagcagctgcccaccatcacagaggcgtcccccagctctctgatcgccttc
cccttcgatgagagcttccccatgacgtgtgaagccaaagggaatcccaagccagaattc
tggtggacgaaaaatggggaagagtttgacccttaccaggacccaaggctgatcaaggag
aaaaactcggggacgtttgtgatccccaacactgggaacctcacagagtaccagggaact
taccgctgttatgcctcgaataaactagggacagccataacagaggaggttgagtttgtt
gtgccccatgtaccgaagtttcctaaggagaagattgatcccattgaggtggaggagggt
cagcctgtcattctggagtgtaaccctcctaaaggaatccctcctttacagatctattgg
atgaccatcggccttcagcacatagagcaggatgacagggtgtccatgggtctgaacggc
gacctgttcttctctaatgctctggagaaggacagccacagagactactgctgcttcgct
gcctttcccaagatacgcaccatcgtacagaagaatgccatgtctgtcatagtcaagagc
aaaaattcaaacaatgactcaagtagcggtccaggtcatgccaattcaatcatggagaga
aaaccaagtcttctgatgccctctggtgtcaagtcggagacacagctggtgaaaggtgat
gagctactactggagtgcattgcagagggctttccaactcccatgattgagtggttgaag
atagaccacatgctgcctgacagagtaacaatagagaaccatgggaaactcctgagcatt
gaccaggttgatgaagatgacaatgggaagtacatgtgtaaggctacgaacatccatgga
atggccgtccactactttgacgtatcagtggaagagcctcctcagtgggtgtctgagcct
gagagccagcttaggatgattggctcagatgtgctcatcaattgctccgccacgggcact
cctcagcccaccatccaatggatggtgaatggaaagcctattgaggaggtcccagcatct
aacagaaaagagtttgatggaaaaatggtcttgcacaaagccaactcgactgacagtgcc
gtctaccaatgtgaggcctccaacagacatggaaccctgctagccaatgtcaatatcatg
atcatgaatctgcctcctatgatcctgacagaggaaggtctggagtattcagcggtggag
gggaaggttatagtgatgcactgcaaggtgttcagttctccaccatctgctattacctgg
aacaaggaggactccccaggatctttggagggtccaaggtttacagttcaccagaatgga
tcattggagatctataatgtggaaaaagaggacatgggccaatacacatgttacaccaag
aatactgaagggacgtctgctatcactgccttactggatgttaaagatcccacaaagata
ttccaggccccggaagacttgcaggtcctaataggaaccacagcccagctctcctgcctg
gcggtgtacgacaactcattcagtggcgactttgagattgtgtgggaaaaagacgatgtg
gagatagcactaaaccacacagagaattctggatatttcgtagaggatggtatactgcag
attgtcaacgtcagccacagagaccagggcatgtacaagtgtgtggccagtactccaatg
gatcaggacactgcctctgcactactcatggtgctggacatcccacatgcacctgagaac
ttggtgctatctgaacacaagggcagaagtgtgaagctcaaatggatccctggggaggac
cacaacagctcaaccactgagttcattattgagtatgaggagagccagtgggagccgggg
acctggagagagcttcagagagttcctggaaatcacggctcggcagtcctcaaactttac
ggacatgtcaactatcgcttccgagtgtctggagtcaacatagtgggcagagggcgcccc
agtgagcccacagagagatacaagacccctcccgcagcccctgacaagaaccctgaaaat
atcaaaattgaaggtcatttgccacatgaaatggatatcaactgggagccattgtccccc
attgaacacaatgggccaggccttgaatataaggtgagttataagagacagcatgtggcg
gaggactggcaagagcatgtggtgaagagacactcgtttgtagtgaaggacactcccacg
tttgtgccatatgagatcaggatccaggcaaggaaccaccacggatggggacctgaaccc
aaagtggtgacgggctactctggagaagacttcccctctgcggctcctgatgatgtagcg
gtggaggtgatgaacaactcgctggtcaaggtcagctggatgcgtgttcacaaggacaag
ctgcatggacatctgggaggctacaggataagctggtggcggctgcgtagtctgctggac
tcaaagaagactcacggggacaaacacactctgacattcccgggggaccggaaccatgcc
atggtaccagggctcacgcccttctctgagtacagcctcatcatcatgaccttcaacagg
cgaggcaatgggccaggtagccacgccgtcaacttcaaaaccccagagggagttccagag
aaaacgccagttttcagggtcacagatgttcagaagcacacagtcactctcacctgggca
cctcctctggaagccaacggagtccttacaggatacctgctagagtatcagctgatcaac
gacacagaggaggtgggtgtcctgcagactgtggatattagcaaccctgacaccaccatg
tgggtcctgcagaacctggaggctatcagcagatacaagttctacctgcgcccctgcacc
agggtgggctgtgggccccgggtcagcaaggagagcaccaccacacctgaagcacgtctg
gcaagcatccagggaggaatctctacccagggctggttcatcggactgatgtgtgtcgcg
gctctcctcacactcatggtgttaatcgcctgctttgtcaacagaaataaaggagggaga
tattccgtaaaggagaaagaggatcttcatccagacctagagtcccagggtatccatgat
gacaccttctgtgaatacagtgacaatgatgagaagccactgaagggcagccagcactct
ctgagcggacagatcaaagcagaggacagtggggacagcctggtggactatggggatgag
gacatccagttcaacgaagatggctccttcatcggcgagtatgcaggtcgcaaagaaaag
aaggtgtccatggaagtcaaaggaaccacgaatcagagcacagcgtga
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