Oncorhynchus nerka (sockeye salmon): 115143471
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Entry
115143471 CDS
T07952
Name
(RefSeq) homeobox protein TGIF1-like
KO
K19553
homeobox protein TGIF2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115143471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115143471
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115143471
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115143471
NCBI-ProteinID:
XP_029539796
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All DBs
Position
LG2:complement(55755681..55763356)
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AA seq
457 aa
AA seq
DB search
MKPLKRALEEEQIRELSSAMSDSDPFEDDGFPLDLSGGGVASGKRRRRGNLPKEAVIVLR
TWLYEHRYNAYPSEQEKLSLSVQTSLSVLQICNWFINARRRLLPDLLRKDGKDPTHFTIS
RRAGKGEGRSSTGGGGSSPESPTSSVPSPAPPPLRPSVIRPAPTLDLSLLGNTATAILTG
AGYPGQEGCCVQALMQLDMHVLLREVEEKGSTVISASPTGGLFNTPPPTPPELCPGQDFS
DLRLLVDAALQRAAEHESQTKTTTEATVCSSAMGLTLPPEQSQATLNSPREQSPTEKAVV
SAVSVPSPGTVSSAPKLTPVFSFIPAPSLPPRQAQIPALVPVSTPVPTFIPAPIKPPVSA
LSPVQTFTPSLTLSPVPISSPTLALVQAPPPALTPFLGLSSSIPSSSSVQRAQSVASVWS
MVHSDVPVRQPGPVAQTPIATVWGAQHTLHAVSETVN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccctaaaacgagctctggaagaggagcagatacgggagctgtcgtcagccatg
tctgacagcgacccctttgaggatgacggctttccccttgacctgtcagggggcggcgtg
gcctctggtaagcggcgtcgccgcggcaacctgcccaaggaggcagtgattgtgctgcgg
acctggctgtatgagcaccgctacaacgcctacccttcagagcaggagaaactcagcctg
tcagttcagaccagcctctccgtgctacagatatgcaactggttcatcaacgcccgtcgc
cgcctcctccctgaccttctccgcaaggacggcaaagaccccacccatttcaccatctcc
aggcgggcaggaaaaggtgagggtcgctcatccactggtggtggaggtagctcccctgaa
agccccacctcctcggtcccctcaccagccccgcccccactccggccctcggtcatccgg
ccagcccccacgctggacctcagcctcctgggcaacacagccacggccattctgacggga
gccggctacccaggccaagagggctgctgcgtccaggccctgatgcagctggacatgcac
gttctcctgagggaggtggaggagaagggctctacggttattagcgccagtcccactggc
gggctattcaacacgccaccccccacccctccggagctgtgccccggccaggacttcagt
gacctgaggctgctggtggacgcagctcttcagagggccgctgagcatgagagtcagacg
aagaccactacagaggccacggtctgcagcagtgctatgggtctgacccttccaccagag
cagagccaagcgacgctgaactcgcccagagagcagagtcccacggaaaaggctgtggtg
tccgcagtttcagtcccaagccccggcacggtctcttcagcacctaaactcaccccagtc
ttttccttcattcctgcgccaagtctgcctcctcgccaggcccaaattccagccctagtg
ccagtttcaacccctgtcccaaccttcatcccagcaccaatcaaaccccctgtgtcagcc
ctaagccctgttcaaactttcaccccttcactaactttatcccctgtcccaatctcatcc
ccaactttagccctagtccaagcacctccgccagccctcaccccattcctaggcctttct
tcctccatccctagcagcagcagtgtccagagggcccagtcggtggccagtgtgtggagc
atggtccacagcgatgttccagttcgacagcctggtcccgtggcacagactcccatagcc
acagtgtggggggcgcagcacaccctgcatgctgtcagcgagacagtcaactag
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