Oncorhynchus nerka (sockeye salmon): 115143511
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Entry
115143511 CDS
T07952
Name
(RefSeq) tubulin beta-6 chain-like isoform X1
KO
K07375
tubulin beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04145
Phagosome
one04517
IgSF CAM signaling
one04540
Gap junction
one04814
Motor proteins
one05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115143511
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
115143511
09144 Cellular community - eukaryotes
04540 Gap junction
115143511
09142 Cell motility
04814 Motor proteins
115143511
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115143511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115143511
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115143511
04147 Exosome [BR:
one04147
]
115143511
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
115143511
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
115143511
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115143511
Exosomal proteins of colorectal cancer cells
115143511
Exosomal proteins of bladder cancer cells
115143511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
115143511
NCBI-ProteinID:
XP_029539869
LinkDB
All DBs
Position
LG15:54728015..54731934
Genome browser
AA seq
476 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGISATGMYQGDDPLQLERLNVYFNEANGGKYV
PRGLLLDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVDTVIDRV
RQESEGCDCLQGFQFVHSLGGGTGSGMGTLIINKIREEYPDRIMTSFSVLPSPKVSDVVV
EPYNATLSIHQLLENTDETFCIDNEALYDICFRTLKLTNPTYGDLNHLVCMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMSGFAPLTARGSQKYRTLSVPELTQQMFDARNMM
TACDPRRGRYLTVAGMFRGKMSTKEVDEQMLMMQQRNSNYFVDWIPHNCKVSVCDIPPRG
LTMASTFIGNNTAIQEIFRRVGDQFSLMFRRKAFLHWYTGEGMDEMEFTEAENNLNDLVS
EYQQYQDAKADEEGWGPEEVAEEESASPAATRVQSTEVTTMETVTETIETIETIAE
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtacatctacagattggacagtgtggaaatcagataggctctaagttt
tgggaggtgatcagcgaggagcatggaatcagtgctacaggaatgtaccagggggatgat
cctcttcagctggagaggctcaacgtctacttcaacgaggcaaatggtggtaaatatgtt
ccccggggcctgctccttgacctagaaccagggaccatggacagtgtcaggggtagccgc
ataggagctctcttcaggccagataactttatacatggaaactctggtgctgggaacaac
tgggccaagggccactatacagagggagcagagcttgtggacaccgtgattgacagggtg
cgtcaggagagcgagggatgcgactgccttcagggcttccagttcgtccactccctaggt
ggtgggacggggtccggcatgggcaccctcatcatcaacaagatccgtgaggagtacccc
gatcgcatcatgaccagcttcagtgtcctgccctcgcccaaggtgtcagacgtcgtggtg
gagccctacaatgccacgctgtccatccaccagctcctagagaacacggatgagaccttc
tgcatcgacaacgaggctctctatgacatctgcttccgtacgttgaagctcaccaacccg
acctacggtgacctgaaccacctggtgtgcatgaccatgagcggagtcacaacctccctg
aggttcccaggccagctcaacgccgatctgaggaagttagctgtcaacatggtgcccttt
cctcgcctccacttcttcatgtcgggctttgcacctctcacagctcgcggcagccagaag
taccgcaccctctccgtgcccgagctcacccagcagatgtttgatgcccgtaatatgatg
accgcctgcgatccccgaagagggcgctatctgaccgtggctgggatgttccgtggcaag
atgtccaccaaggaagtggacgagcagatgctgatgatgcaacagaggaacagcaactac
tttgtggactggatccctcacaactgtaaagtatccgtatgtgacatcccacctcggggg
ctcacaatggcttccaccttcattggcaacaacacggccattcaggagatcttccgtcgc
gtaggagaccagttctcgctcatgttcaggcgcaaggccttcctgcactggtacactggc
gagggcatggacgagatggagttcacagaggcagagaacaatctgaatgacctggtgtcc
gagtaccagcagtaccaggatgccaaggctgacgaggagggttgggggcccgaggaggtg
gctgaggaagagtcggcttcaccggctgcaacgagagttcagagtacggaagttacgacg
atggagactgtgacagagactattgaaaccattgagactatagctgaatag
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