Oncorhynchus nerka (sockeye salmon): 115143549
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Entry
115143549 CDS
T07952
Name
(RefSeq) ras and Rab interactor 2-like
KO
K23687
Ras and Rab interactor 2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115143549
Membrane trafficking [BR:
one04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115143549
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Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
Lpg0393_VPS9
SH2
RA_2
RelB
Motif
Other DBs
NCBI-GeneID:
115143549
NCBI-ProteinID:
XP_029539911
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Position
LG15:complement(1610055..1641350)
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AA seq
990 aa
AA seq
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MGGKKRKKELIDPFCGEIGELKQEMVQTSPTEDRDPYPMVLQGLEGELSGVYLQSSPCAG
TSGERDSGYDSLRRRMSVLDRLRHTHPVWLLLTLSDTEATHILLQQPPGVFLVRKSSTLQ
RKVLSLRVSDDDASGGAGICDFPVRESQYTFSLEGSGISFADLFRLVAFYCISRDVLPFT
LNLPEAIAASKTQKDLEEVAQLGAGFWHSALGSLRRTTTPSRPPPQRPDRDGDIQGAERT
QEKQSATCHNSVPPARPSSSSSSRLERSQSNGALCFVNPLFLQTHRRLEEDPQSSSSSPF
PYVTHSTPSPGTTGGTSSAPVTDPNVTRKSRPPRPPPPHSRLFPPPRSLSQRRQAPPPPT
PLPQKPKSSMPETPAAIVVTRQPLQPSSNQNLRPTPRPPMGARHSSHSKNMTSSAAIPVP
HQHPQHPPPRRPNKPDIDAHRCHIALDDETIAKALSRAKLPPCQTPAIPTPSIVGNGAGS
PPSPPGKTPRREGQEGRLSDMSISTSSSDSLDYSQRPLSLPASPPLRLRHHLGNNKDSSD
DEDLCDEEEEDYGVSLENDLDQGLRPPFKAHRRGVGVKVALSFRKVSGVFSTFMTPERRA
VRRIAELSRDKSSYFGCLVQDYISFVQENKGCHTSGLDLLQTLRQFMTQMKAYLTQSSEL
DPPIESLIPEDQIDSVLEKAMHKCVLKPLKGVVEVALHDFQVSSGGWQQLRENLALAKTR
RPQDLGVDGAVPPDPMAIEKIRHKFHNMRKMYSPDKKVSLLLRVCKLIYTIMQDNSGRMY
GADDFLPMLTYVLAQCDMPQLDTEILYMMELLDPTLLHGEGGYYLTSAYGAMALIKNFQE
EQAARVLSSEARDTLHQWHRRRTAQRTAPSVDDFQNYLRVALQEVNSGCTAKTLLVHPYS
TTEEVCSLCAYKFKVNDPENHSLFLITEATSQQLAPDTHPQRIKAEIHSHPNSQPFHFVY
RRVPNLNLCIPAIPANQHNGNCLLPSQLDE
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggggggaaaaaagagaaagaaggagctgatagacccgttttgcggggagataggggag
ctgaagcaagagatggtccagacctccccaacagaggacagagacccataccctatggtt
ctacaggggttggagggggagttgagcggggtttacctccagtcctcgccctgtgctggc
accagtggtgaaagggattctgggtacgactccctgcgtaggaggatgagtgtgctggac
agactgaggcatacgcaccccgtgtggctcctgctcactctcagtgacacggaggccaca
catatactgctgcagcagcctccaggggtattcctggtgaggaaatcatccactcttcag
aggaaagttctgtctctaagggtcagtgatgatgacgcctcaggaggagccggcatctgt
gacttccctgtcagagagagtcagtacaccttttctctggaaggatctgggatcagtttt
gcagacctgtttcgcctggtggccttctactgtatcagcagggacgtccttcccttcacc
ctgaatctcccagaagccattgcagcctccaagactcagaaagacctggaggaggtggcc
caactaggagcaggattctggcactctgctctaggcagcctgcgaaggacaaccactccc
tctcgccctccaccacagcgccctgacagagacggtgacatccagggtgcagagaggaca
caagagaaacagagtgcgacttgccacaacagcgttcctccagctcgtccctcttcctcc
tcctcctctcgcctggagagaagccagtccaacggggctctttgcttcgtcaaccccctc
ttcctccagactcaccggcggcttgaggaagaccctcaatcctcttcctcctctcctttc
ccctacgtcacacactccacccccagcccaggaactaccggtgggacgtcttcagcccct
gtcacggaccccaacgtgaccaggaagtcacgtccacctcggcccccgcctccccattcc
cgcttattcccgcccccccgttccctctcccagcgccgccaagctccccctccccccacc
cctctaccccagaagcccaagagcagcatgcccgaaacgcccgcagccattgttgtcacc
aggcaaccactgcaaccttcatccaatcagaatcttcgccccacccctcgccctcccatg
ggtgccaggcacagcagccattccaaaaatatgacaagcagcgccgccatccctgtgccc
caccaacaccctcagcaccctcctccccgacgccccaataaacctgacatcgacgcccac
cggtgccacatcgctcttgatgacgaaactatcgccaaggctctgtcccgtgccaagctt
cccccttgccagacaccggccatacccactccctccatagtgggaaatggtgctggtagc
cctcccagccctccgggtaagacccccaggcgagagggacaagaggggaggctgagcgac
atgtccatctccacctcttcctcagattctctggactactcccagcgtcccctctccctc
cccgccagcccccctctcagattacggcatcaccttggcaacaacaaggacagcagcgac
gacgaagacctctgtgacgaagaagaggaagactacggtgtcagcctggagaacgacctg
gaccagggcctccgtcctcccttcaaagcccaccggagaggggtcggggtcaaagttgcg
ctgagtttccggaaagtttctggagtcttcagcacgttcatgaccccagaaaggcgagcc
gtgaggaggatagcggagctctccagggacaagagttcctactttggatgcctggttcag
gattatatcagttttgtacaggagaataaggggtgtcatacttcaggcttagacctcctg
cagaccctcagacagttcatgacccagatgaaggcctacctgacgcagagctccgaactg
gacccgcccatcgaatccctcatacccgaggatcagatagactctgtcctggagaaggcc
atgcacaaatgtgtgttgaagccgctgaagggcgtagtggaagtggccctgcacgacttc
caggtgagcagtggaggctggcagcagctgagggagaacctggccctggctaagacccgg
aggccccaggacctgggtgtggacggggctgtgccacctgaccccatggccattgaaaag
atccgccacaagttccacaacatgaggaagatgtactccccggataagaaggtgtcgctg
ctgctccgagtgtgtaaactcatctacaccatcatgcaggataactcaggtaggatgtac
ggagcagatgacttcctaccgatgctgacctatgtcctggcccagtgtgacatgcctcag
ctggacactgagatcctctacatgatggagctgctggatcccacactgctacatggagag
ggtggctactacctcaccagtgcgtacggggccatggctctcatcaagaacttccaggag
gaacaggcagccagggtcctcagctccgaggccagagacaccctgcatcagtggcaccgc
cgacgcaccgcccagcgcacggcaccctccgtggacgacttccagaactacctgcgagtc
gccttacaagaagtcaacagcggctgcacagccaaaaccctcctagtccacccgtactcc
accaccgaagaagtatgctcgctctgcgcctacaagttcaaagttaatgacccagagaac
cactccctctttctcatcactgaggcaaccagtcagcagcttgccccggacacacacccc
cagcgaatcaaagcggagatacacagccacccaaactcgcaacccttccattttgtctac
cgcagagtgcccaaccttaacctgtgtataccagctatcccagctaaccagcacaatggc
aactgcctactgcctagccaattggatgaatga
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