Oncorhynchus nerka (sockeye salmon): 115143587
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Entry
115143587 CDS
T07952
Name
(RefSeq) alpha-(1,3)-fucosyltransferase 9-like
KO
K03663
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase [EC:
2.4.1.152
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00515
Mannose type O-glycan biosynthesis
one00601
Glycosphingolipid biosynthesis - lacto and neolacto series
one00603
Glycosphingolipid biosynthesis - globo and isoglobo series
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
115143587
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
115143587
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
115143587
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115143587
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.152 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase
115143587
Glycosyltransferases [BR:
one01003
]
Glycan extension
Lewis blood group
115143587
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_10
Glyco_tran_10_N
Glyco_trans_1_2
Motif
Other DBs
NCBI-GeneID:
115143587
NCBI-ProteinID:
XP_029539948
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Position
LG15:10673730..10678230
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AA seq
397 aa
AA seq
DB search
MECRNDVSSRSEYSTSTNLLTGAKMLSSIYLTGVLRVILVSIISLGGFVVLFLMHYSSAP
SLFCPPLPAFPPQYSERPRGQHNSSLAKTLPDKPIMLLWFWPEHYRFDLSDCATLFNIDS
CLLTDDRSIYNKADGVLIFHKSIKQDLSNLPRSPRPPFQKWIWFHVESPTNTNRLSGLEN
LFNLTLSYRQDADIPIRWRLTARKGQGEDFVLPKKDKLVCWIVSNNNPATGSGQRYNYYR
ELVKHVKVEVFGKAFGRFLKYEDYYDTISSCKFYLSFENSVHRDYITEKLNGPLAAGTVP
VVLGPPRQNYEDFVPGDSFIHVNDFPDVKALAEFLLKLDKDDEAYLHYFQWREHFSAQRH
LIQQYQEFTHAICYACDHVGTHKEYRVVHNLYKWYFG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtaggaatgacgtcagcagccgttctgaatacagcacgagtacaaacctcttg
accggagcaaaaatgctgtctagcatttacctaactggagttctacgtgtcattctggta
tcgattattagtttaggaggatttgtggtgctgtttttaatgcattacagctcagcacca
tctctgttctgccctcccctgcctgctttcccaccgcagtactcagagagaccccgagga
cagcacaacagctccttggctaagaccctaccagacaagcccattatgctgttgtggttc
tggcctgaacactacaggtttgacttaagcgattgcgccactctcttcaacattgatagc
tgtctcctgactgatgacaggtctatatacaacaaggcagacggggtgctcatctttcac
aaatccattaagcaagatttatccaacttgcctcgatcacccaggccaccattccagaag
tggatctggttccatgttgaatcccctacaaacacaaacaggctatctggtctagagaac
cttttcaatttgaccttgagttacaggcaggacgcagacatccctattcgttggcgcttg
accgcaagaaaaggccagggggaggattttgtgctgcccaaaaaagataaattagtttgc
tggattgtgagtaacaataaccctgccactggatcaggccaaaggtataactattacaga
gaacttgtcaaacacgttaaggtggaagtctttggcaaggcctttggccgtttcttgaaa
tatgaggactactacgataccatctccagctgtaagttttacctttcctttgagaactca
gtccacagagattacatcactgagaagctaaacggaccacttgcagcaggaactgtacca
gtagtattgggcccacctagacaaaactatgaggactttgtcccaggagattccttcatc
catgttaatgactttccagatgtgaaagccctggcagaattcctcctgaagttagacaag
gatgatgaggcatatctgcactactttcagtggcgtgaacacttttctgctcaacgccat
ctaattcaacagtatcaagagttcacccatgctatttgttatgcctgtgaccatgtggga
acacataaggagtacagagttgttcacaatctttacaaatggtattttggttaa
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