Oncorhynchus nerka (sockeye salmon): 115143664
Help
Entry
115143664 CDS
T07952
Name
(RefSeq) lumican-like
KO
K08122
lumican
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115143664
Proteoglycans [BR:
one00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
115143664
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_14
LRRNT
LRR_9
Motif
Other DBs
NCBI-GeneID:
115143664
NCBI-ProteinID:
XP_029540001
LinkDB
All DBs
Position
LG15:26580669..26589090
Genome browser
AA seq
376 aa
AA seq
DB search
MAVQVSVLSLVLTLSLGLMMSVCRPVCGTPGTTQDLDYGGVPLWINRLLGEPSVFSLRGR
MDRAWYRANNPQSCPDLCDCPIQWPSALYCDHRDLGELPDSMLYNTQYLFLQGNNISSLP
SSSLTNSSGLRWLILDDNRLQTDGLQTSTLQNLTQLQYLFLNHNKLTVVPSGLPRSLRQL
RLAHNLITSISPGTFGNLHNLTLLLLQGNRLNVITETDFTGLVSLNLLSLSGNLFSSFPS
HLPPSIQQLYLSNNSLSGLGEESLQGFTNLRYLRLSRCGLVSPSLHPQSFNLSSLVELDL
SYNKLTTIPLVPLTLQYLYLEANHIQEFNISSFCREVGPLSYSRMRILRLDGNKMSYHLL
PPEWVYCLRVLHHIYI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctgtacaagtgtcggtgctgtccctagtcctcactctatccctgggcctgatgatg
agtgtctgcaggcctgtgtgtggcaccccagggacaacccaggacctggactatggaggg
gttcctctctggatcaaccgtcttctgggggaaccctctgtattcagcctgaggggccga
atggaccgggcatggtacagagccaacaacccccagtcctgccctgacctgtgtgactgt
cctatccagtggccctcagctctgtactgtgaccacagagacctgggagagctgccggac
agcatgctttacaatacacaatacctgttcctgcagggcaacaacatctcgtccctgccc
tcctcctctctcaccaactcctcaggactccgctggctcatcctggatgataaccgtctg
cagacagacgggctgcagacctccacgctgcagaacctgacccagctccaatacctgttc
ctcaaccacaataagctgactgtcgtgccctctggcctgcccaggagcctgcggcagctc
cgactggcacacaacctcatcaccagcatctccccaggaaccttcgggaacttacataat
cttacattgctgctactgcaggggaataggttgaacgtgattacagagactgacttcaca
ggcctggtgtctcttaacctgttgagcctgagcgggaacctcttctcctccttcccctcc
caccttcctccctccatccagcagctctacctctccaacaactctctgtctggcctgggg
gaggaaagtctacagggcttcactaatctcaggtacctgcgtctgagccgctgtggttta
gtgagcccttccctccacccccaatccttcaacctgtcttcccttgtggagctggatctc
tcttacaacaagctgacaaccatccccctggttcccctcacactacagtacctgtacttg
gaggccaaccacatacaagagtttaacatctctagtttctgtcgggaggtgggtcctctg
tcgtactccaggatgaggatccttcgtctggacggcaacaagatgtcctatcatctacta
ccacctgaatgggtctactgcctccgagtcctgcaccacatatacatctaa
DBGET
integrated database retrieval system
