Oncorhynchus nerka (sockeye salmon): 115143667 Help Entry 115143667         CDS       T07952                                  Name (RefSeq) integrin alpha-5-like   KO K06484   integrin alpha 5 Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one03266   Virion - Herpesvirus one04145   Phagosome one04510   Focal adhesion one04512   ECM-receptor interaction one04810   Regulation of actin cytoskeleton one04820   Cytoskeleton in muscle cells one05100   Bacterial invasion of epithelial cells one05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:one00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03266 Virion - Herpesvirus     115143667  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115143667  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     115143667   09144 Cellular community - eukaryotes    04510 Focal adhesion     115143667   09142 Cell motility    04820 Cytoskeleton in muscle cells     115143667    04810 Regulation of actin cytoskeleton     115143667  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     115143667   09171 Infectious disease: bacterial    05100 Bacterial invasion of epithelial cells     115143667  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:one04147]     115143667    04515 Cell adhesion molecules [BR:one04515]     115143667    04090 CD molecules [BR:one04090]     115143667 Exosome [BR:one04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    115143667 Cell adhesion molecules [BR:one04515]  Integrins   Integrin alpha subunits    115143667 CD molecules [BR:one04090]  Proteins   115143667 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3 DUF11 Integrin_alpha Motif Other DBs NCBI-GeneID:  115143667 NCBI-ProteinID:  XP_029540006 LinkDB All DBs Position LG2:complement(56826021..56877868) Genome browser AA seq 1062 aa AA seqDB search MGTGRRLSAISVNSILRNPGYCARFVVIAVVFIQLCATFNLETENRIVYSGPKGSFFGYS VDFFYNNASSFSILIGAPKANTSQTNIIEGGSVYLCPWSQDQSDCSVVNFDNEGDRSFHV NDVDVQVEFKSHQWFGATVRSHGNTVLACAPRYYWRTEHDAPFSDATGTCYLSVDNLKTF VEYAPCRTERHGPAGQGYCQGGFSADFTKDGKVVLGGPGSFYWQGQLVSATTEEIVKAYF PSYFLLSVTGQIQTRQVQGSYDDSYLGYSVAGGEFSGDDIEDFITGVPKGLMLHGLVSLL NGTDLKSMLNLTGEQMGSYFGYAVAATDINNDGLDDLVVGAPMFMQRGSDGLRWEEVGRV YVYLQQRPLLFEPSLPPLGGSQAFGRFGSSLAPLGDLNQDGFNDIAIGCPFGGDDQQGLV LIYNGHASGLKDTPTQALAGQWASGTFPASFGYALRGEKDLDQNGYPDLIVGAFGADKAV LYRARPIVNASASLTVQPTMINSEEKSCMVSNGNKTISVSCVNLSFCLSANGKHLPADLV FMVEVQLDHLEQKQRESSVRRTLFLDSHQPSLLETITMANGGPTCHDTRIYLRSEGEFRD KLSPIYITLNFSLDPLAQLDLHGLKPILNYQTTHIIKQKAQIQLDCGEDNICVPDLKLAV YGDRTEVYLGDENSLTLTFNARNEGEGGAYEAELYVVLPAEADYSGIARNNASLTQLTCS YEAENQTRSLVCDLGNPMKSGTSLWAGLRFTVPRLKDTHNTVQFELQIRSKNENKSQSDD ELFHLEVTVVADVILQGVSRPDKLLFPPPNWRMSHSLQEEQDVGPEIQHVYELVNNGPSM ISQSVLELRCPLKSQGHDLLYPLEVITQGPLDCSSNHTLNALKLKLQPPTTEQPPSPLTA SPEHHVQRREVYRDPLDEQGNLSCSTAECWRLRCHVGLLERGSSVILTVRSRIWPEAFLE RAYKQYVLECSVEYGVEKMPYSIAPKLKPSGSKKVLTPVMWNKPDSQYMVPLWIIILAIL AGLLLLALVIYVLYKLGFFKRSNPYGTTMEKAQLKPQASSEA NT seq 3189 nt NT seq  +upstreamnt  +downstreamnt atgggcactggacgacgactttcagcaatttcagtcaactcaatcctgcgaaatccaggt tattgcgcccggttcgttgtaattgcagttgtttttatccagctgtgcgcaacgtttaat ttagaaacagaaaaccggatcgtctactctggacctaagggatcttttttcggttattcc gtggattttttctacaataatgcatctagtttcagtattctgattggtgctcccaaagct aacaccagccaaacgaacatcatcgaaggtggatctgtgtacttgtgtccctggagccag gaccaatcggattgcagtgttgtcaattttgacaatgaaggggatcgcagcttccacgtc aacgacgtcgacgtccaggtcgagttcaagtcccatcagtggtttggggctacggtgcgt tcccatggcaacactgtcctggcttgtgccccaagatattactggagaacggaacacgat gccccgttctcagatgccacaggaacctgctacctctccgtggacaacctcaagacattt gtggagtacgccccctgtcgcacagagagacatggtcctgcaggacagggctactgtcag ggtgggttcagtgctgacttcaccaaggatgggaaggttgttctcggaggaccaggaagc ttttactggcaaggtcaactagtctcagccaccacagaggaaattgtcaaggcctacttc ccatcctacttcctgctctctgttactgggcagatccagactcggcaggtgcaggggagc tatgacgacagctacctcggttactctgttgccggcggggagttcagcggagatgatatt gaagacttcatcaccggagttcccaaaggactcatgctgcatggtttagtgtcattactc aatgggacagatctgaaatccatgctgaacctaactggagaacagatgggttcctatttc ggctacgcagtggcagccaccgacatcaacaacgatggtctggatgacctggtggtgggt gctcccatgttcatgcagagggggtctgacggactacgttgggaggaggtgggccgtgtc tatgtgtacctacagcagcgtcccttgttgtttgagcccagcctgccccccttgggaggg agtcaggccttcgggaggtttggaagctccctggccccgctgggagacctcaaccaggac ggcttcaacgatattgcaattggctgtccctttggaggagacgaccaacagggattggtc ctcatctataacgggcatgccagtgggctgaaggacacgcccactcaggctctagctggc caatgggcctctggcacctttcctgccagttttggctatgccctccgcggagagaaagat ctggatcagaatgggtacccagatctcatcgtaggtgcttttggggctgacaaggctgtt ctgtacagggctcggcctattgtcaacgccagtgcttctcttactgtgcaacctaccatg atcaactcagaggagaagagttgtatggtgtccaatgggaacaagactatctctgtgtct tgtgtcaacctcagtttctgcctctcggccaatgggaagcacctccctgctgatctagtt tttatggtggaggtgcagttggaccatctggagcagaaacagagagagtcatcagtgagg agaactctgttcctagatagccatcagcccagcctgctggagaccatcaccatggccaac ggaggaccaacgtgtcacgacacccgcatctacctgcgcagtgaaggggagtttcgggat aaactgtcccccatttacatcaccctcaactttagcctggatcctctcgctcaactggac ctccatggcctaaaacccattctaaactaccagacaacacatattataaagcagaaggcc caaattcagctggactgtggggaggacaacatctgtgttcctgacctcaaactggctgtt tatggcgataggacagaggtgtatcttggcgacgagaactccctgaccctgaccttcaat gccaggaacgagggagagggcggggcctacgaggcagagctttacgtggtactgcccgcg gaggctgactacagtggtatagcccgcaacaatgcgagtctgactcagctgacctgtagc tacgaggcagagaatcagacccgctctctggtctgtgacctgggcaaccctatgaagtct ggaacaagtttgtgggcaggcctccgcttcactgtgcctcgactgaaggacactcacaat acagtacagtttgagctccagatacgcagtaaaaatgagaataaatcccagagtgatgat gagctctttcatctggaggtgactgtggttgctgatgttatcctacagggcgtttctcgt ccggacaagctcctcttccctcccccgaactggaggatgagccacagcctacaagaggag caggatgttgggcctgagatccagcatgtgtacgagttggtgaacaacgggcccagtatg atcagtcagtcagtgctggagctgcgctgccctctaaaatctcagggtcacgaccttttg taccctctggaggtcatcactcagggaccactcgactgcagctccaaccacaccctcaat gcactgaagctcaagctccagcctcctacaacagagcagccaccctcaccactgacagcc agccctgaacaccacgtccagaggagagaggtctacagggatcctctggatgaacaagga aacctgtcgtgttccaccgctgagtgctggaggctgcgctgtcatgtcgggttactggag agaggaagcagtgtcattctgaccgtccgctcacgcatctggcctgaggccttcctggag agggcatacaagcagtatgtgctggagtgttctgtggagtacggagtcgagaagatgccc tattccatcgctcccaaactcaaacccagtggatccaagaaggtcctgactccagtgatg tggaacaagccagacagccagtacatggtaccactgtggatcatcattctggccatactg gctggattgctgctgcttgccctggtcatatatgtactctacaagttgggcttcttcaaa cgatccaatccttatggtacgaccatggagaaagctcaactcaaaccacaggcttcttct gaggcctaa

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