Oncorhynchus nerka (sockeye salmon): 115143707
Help
Entry
115143707 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04260
Cardiac muscle contraction
one04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115143707
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115143707
04261 Adrenergic signaling in cardiomyocytes
115143707
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115143707
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115143707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA_3
VWA
MCP-like_PDC_1
VWA_2
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
115143707
NCBI-ProteinID:
XP_029540038
LinkDB
All DBs
Position
LG15:complement(12366412..12419083)
Genome browser
AA seq
1075 aa
AA seq
DB search
MLWNWRILFPHVCCASFLLFWIMLGTVVEVMGSQPGIPLSVVKLWASAFGGEIKSISAKY
SGSQLLQKKYKEFEKSVRVEEIDGMKVVKTLAKKMEEMFRMKKEAMRRLVEAAEEAHLQH
EEDPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNDHFNNLSVNLSLSVVQVPTNMYN
KDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAFD
CRNRKWYIQAATSPKDMVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAVSII
NDLFVGASGPPQRAESREHGFNVCIACVFSLCAXFNQTGHGSVCSQAIMLVTDGATQMYD
DVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANKGYFSQISTLADVQENVMRYLHV
MSRPKVIDHEHDTVWTEAYVDSTLSQAHKSRNKKGPSLMTTVAMPVFSTKNETKNQGILL
GVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNGYILTHPDLRPLYQEGQKRRKPNYSSV
DLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTVDKGKRLLKMHNDYFYTEVKGTPFSVG
VALSRGHGKLFFRGNVSVEAGLLDLEQPDVALADEWTYCNTDEHHEHRSLSQIQAIKLYL
TGRKPHIKCDRELIQEVLFDAVVTAPLEAYWTGLALNKSENSDKGVEIAYLGTRTGLSRT
SLFVVPEHLSNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTFVYSIPFGGMETLTQNN
KSVVLASTAIQLLDDRKSPIVASVGIQMKLDFFQRKFWTASRQCAALDGKCTISCDNEDI
KCYLIDNNGFILVTEDYSQTGLFFGEVESAVMNKLLLMGSFKRITLYDYQALCRVYAGSS
DSARSLSHPFSIVKWLLTKLVIFLLEFNLYSWWHVDLSVKAQRSRGKTMMVPCDTEYPAF
VSERTIKETTGNIDCEGCARYFVIQQIPSSNLFMVVVDNKCDCSSAPLVSMDPIEIMYNE
SLKCDRLKFQKDRKRPETCHPFHPEENAMECGGTAGLSAPLTAALLPLLATLISR
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggaattggaggatcctctttccacacgtgtgctgcgccagcttcctcctgttc
tggattatgctgggcacggtggtggaggtgatggggtcccagccagggattcctctctca
gtggtgaagttatgggcctcagcgtttggtggagaaattaaatcaatttctgcaaaatac
tctggatcccagttgctgcagaagaaatataaagaatttgagaagtccgtccgagtggaa
gaaattgatggcatgaaagtggtcaaaactctcgcaaagaagatggaggaaatgttccgg
atgaaaaaggaggccatgcggcggctggtggaggcagcagaggaggcccatctacagcac
gaggaggacccagagctgcagtatgagtactttaacgcggtgctgatcaacgaggtggat
gaggagggcaacaacgtggagctgggaggcgagttcgttctggaacccaacgaccacttc
aacaatctgtcagtcaacctcagcctcagtgtggtgcaggtgcccaccaacatgtacaac
aaagatccagccatagtgaatggggtgtactggtcagaggccttgaataaagtgtttgtg
gataactttgaaaaagatccgtccctgatatggcagtactttggcagtgccaagggcttc
tttaggcagtatcccggggtcaaatggcatccagacgaacacggggtcatcgccttcgac
tgcaggaacaggaagtggtacatccaggcagcgacgtctcctaaagacatggtgatcctg
gtggacgttagtggcagtatgaagggcctgagactgaccattgccagacagactgtttcc
tctatactggacacactgggagacgatgacttcttcaacatcatcgctgtcagtatcatt
aatgacctgtttgtgggggctagcggtccgccgcaacgcgcagagtcccgtgagcacggc
ttcaatgtctgcattgcgtgtgtgttctctctgtgtgcgtagtttaaccagactgggcat
ggcagtgtgtgtagccaggctatcatgctggtgactgacggggcaacgcagatgtatgac
gatgtcttcgccaagttcaattggccagacagaaaggtgcgcatattcccttacctgatt
ggccgagagtctgcctttgctgataacatgaaatggatggcctgtgctaataaagggtat
ttcagtcagatctccacactggctgacgtacaggaaaatgtgatgaggtatcttcatgtt
atgagtcgtcctaaagtcatcgaccatgagcatgacacggtctggacggaggcctacgtg
gacagcactctctcccaggcacacaagtccagaaacaagaagggcccaagcctgatgacc
actgtggccatgcctgtgttcagcaccaagaacgagaccaagaaccagggtattctccta
ggggtagtgggcacagacattcctcttcaggaactcatgaagatcatccctaaacacctg
ctgggtatccacggttacgcctttgccatcacaaacaacggctacatcctgacccatccg
gacctgaggccactgtaccaggagggccagaagaggaggaaacccaactacagcagtgtg
gacctgtcagaagtggagtgggaggacaaggatgactttctgcgtaatgccatggtcaac
aggaagactgggacattctccatggaggtgaagaagacagtggacaaagggaaaagactc
ctgaagatgcacaatgactatttctacactgaagtcaagggaactcccttcagtgttgga
gtggctttgtctagaggccatggcaaattattcttcagaggaaacgtctcagtggaagca
gggctccttgacctggaacagccagatgttgcgctggcagatgaatggacgtattgcaac
acagatgagcaccatgagcaccgctccctctcccagatccaggccattaaactctacctg
accggacgcaagccacacatcaaatgtgacagggagctgatccaggaggtgttgtttgat
gctgtggtcacagccccactggaggcctactggaccggcctggccctcaacaagtccgag
aactcagacaaaggagtggagattgcttacctaggcacacgcactggcctctctagaacc
agcctgtttgttgtcccagagcacctatccaatcaagacttcctgacggcagaggataag
gagggggtgttcaacgctgaccacttccctctgtggtacaagagagcagcagagcaggtt
cccggcacctttgtctactcgatcccctttggaggtatggagacacttacacaaaacaat
aagagtgtggttttggccagcactgccatacaactgctggatgacaggaagtcgcctatt
gttgcctccgttgggattcagatgaagctggatttctttcagaggaagttctggaccgct
agtagacagtgtgctgctctggatgggaagtgcaccattagctgtgataatgaggacatc
aaatgttaccttattgacaacaacggatttattctggtcacagaggactactctcagacg
gggctgttctttggagaggtggagagtgctgttatgaacaagctgcttctcatgggctcc
ttcaaaaggatcactctgtatgactaccaggctctctgtagagtgtatgctggcagcagt
gacagcgcacgctctctatcacatcccttctccatcgtgaaatggctcctgaccaaactt
gtcattttcctgctggagttcaacctttacagctggtggcatgttgatctctcagtcaaa
gcccaaaggtcgaggggaaagaccatgatggtgccatgtgacacggagtaccctgcattc
gtctctgagcgtaccatcaaagagaccacgggaaacattgactgtgaggggtgtgccaga
tattttgtaattcagcagattcccagcagtaatctcttcatggtcgtcgtggacaacaag
tgtgactgcagctctgcccccctggtttccatggatcccatcgagataatgtacaatgag
tctctgaaatgtgataggctgaagtttcagaaagacagaaagcggccagaaacgtgtcat
ccttttcaccccgaggagaatgccatggagtgtggaggaacagcaggcctctctgccccc
cttacagcagcactgctccccctactggccactctcattagcaggtga
DBGET
integrated database retrieval system
