Oncorhynchus nerka (sockeye salmon): 115143878
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Entry
115143878 CDS
T07952
Name
(RefSeq) GATOR complex protein WDR24-like isoform X1
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
115143878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115143878
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
115143878
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_HPS5
zf-RING_16
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
115143878
NCBI-ProteinID:
XP_029540170
LinkDB
All DBs
Position
LG16:complement(721468..728923)
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AA seq
793 aa
AA seq
DB search
MEKMSRVTTALGSSTISGRTMFCHLDAPANAISVCRDATQVVVAGRNIFKIYGLEEEQFV
EKLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLGKPSRNKQDQLFTEHK
RTVNKVCFHPTEVYMLLSGSQDGYMKCFDLRKKESVSTFSGQSESVRDVQFSMKDYFTFA
ASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPDDRGWLATGGRDKMVKVWDMTTN
RAKEIYCVQTIASVARVKWRPERKWHLATCSMMVDHNIYVWDIRRPFIPFATFEEHKDVT
TGIVWRHQHDPYFLLSGSKDSTLYQHMFKDASRPVDRANPEGLCFGLFGDLAFAAKESLI
SGDANRKPYPGGDRRYPIFFFKKPDLTEQFAHVSSALSVFESSLESKCMDWFVKTARLYL
LSGKPFAELCDHNAKVAKELNRPQVSTTWTMLRIMFSDPANLSTPGPNHIGKLGTLPLMN
SFSMKEMGMGTESRLDRSKGESRQDNIHLELGNSLINSNNDDICPTAENEETEGSEGQAE
YMFGDAELDDDDLYSMEHDNQAAEEQEYTLPQEAFPLRHEIMDNPLAPEHLQQDKADSPQ
ASGNEAEVMCLTPIESFSLISISQPLFSPHLPAPFFCPVVREMLSHYAEQGDVQMAVSVL
IVLGDRIRKEIDDLTQEHWYMSYIDLLQRFELWNVSNEVIKLSTCSAITCLNQTSTTLHV
NCSNCKRPMSNRGWICDRCHQCASICAVCHHVVKGLFVWCQGCSHGGHLEHVKNWLKSSS
HCPAGCGHLCEYT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgtctcgggtcactacggccctaggcagcagcaccatcagcgggcgcacc
atgttctgccacctggacgcgcccgccaacgccatcagtgtgtgtcgcgatgccacgcag
gtggtggtggccggccgcaatatcttcaagatctacggcctggaggaggagcagtttgtg
gagaagctcaacctgcgcgtgggccgcaagccctcgctcaacttcagctgcgctgacgtc
atgtggcaccagatggaggagaacctgctggccacggctgccaccaacggggcagtagtc
acctggaacctgggcaaaccgtcgcgcaacaagcaggaccagctgttcaccgagcacaag
cgcacagtcaataaggtgtgcttccaccccaccgaagtctacatgctgcttagtggctcc
caggacggctacatgaagtgcttcgacctgcgcaagaaagagtctgtcagcaccttctca
ggtcagtcagagagtgtaagagatgttcagttcagcatgaaggattactttactttcgct
gcttcctttgagaatggtaatgtccagctgtgggacatacggaggccagaccggtatgag
aggatgttcacagcccacaccggacctgtgttttgctgtgactggcaccccgatgacagg
ggctggctggccactggtggccgggacaagatggtgaaggtgtgggacatgaccaccaac
cgggccaaggagatctattgcgtccagactattgcctcggtggcccgggtcaagtggcgt
cctgagaggaagtggcacctggccacctgctccatgatggtggaccacaacatctatgtg
tgggacatccggaggcccttcatcccctttgccaccttcgaggagcacaaggacgtgacc
acaggtattgtgtggcgccaccagcacgacccctacttcctattgtcaggttccaaggac
agcacgctctaccagcacatgttcaaggatgccagccggcccgtggaccgggccaaccct
gagggactgtgcttcggcctgtttggcgaccttgccttcgctgccaaggagagcctcatc
agtggcgacgccaacaggaagccgtacccgggtggtgaccgccgttaccccatcttcttc
ttcaaaaagcccgacctgacggagcagtttgcccacgtgtccagcgccctcagcgtgttt
gagtcgtctttggagagcaagtgcatggactggtttgtcaagacggcacgcctctacctc
ctcagcggcaaaccctttgccgagctgtgtgaccacaatgccaaggtggccaaggagctc
aacagacctcaggtttccactacatggacgatgcttcggatcatgttctcagacccagcg
aacctctcaacgccgggtccaaatcacattggcaaactgggcacccttcctttaatgaac
agtttcagtatgaaggagatgggcatggggacggagagcaggctggaccgcagtaaagga
gagagcagacaggacaatattcacctagagcttgggaactcgctaatcaacagcaacaat
gacgatatttgtcccactgcagagaatgaagagaccgagggaagtgagggccaggcggag
tacatgtttggtgatgctgagctggacgacgatgacctctactcaatggagcacgacaac
caggccgcggaggagcaggagtacacgctcccccaggaggccttcccactgcgccacgag
atcatggacaacccgttggcgccggagcacctgcagcaggacaaggccgactcgccgcaa
gccagcggcaacgaggcagaggtcatgtgcttgacgcccatcgagtccttctccctgatc
tcaatctcccagccactgttcagcccccatcttcctgcccccttcttctgccctgtggtc
agggagatgctgagccattatgccgagcagggcgacgtgcagatggctgtttcggtgctc
attgtcctgggagaccgcatccgcaaggagatcgacgacctcactcaggagcactggtac
atgtcctacattgacttgctgcagcgtttcgagctgtggaacgtgtccaacgaggtcatc
aagttgagcacttgcagcgccatcacctgtctgaaccagacatccaccactctgcatgtc
aactgcagcaactgcaaacggcccatgagcaacaggggctggatctgtgacagatgccac
cagtgtgccagcatttgtgccgtgtgccaccacgtggtgaaggggctgttcgtgtggtgc
cagggctgcagtcacggcgggcacttggagcacgtgaagaactggctaaagagcagttcc
cactgcccggccggctgcggtcacctgtgtgagtacacctga
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