KEGG   Oncorhynchus nerka (sockeye salmon): 115143886
Entry
115143886         CDS       T07952                                 
Name
(RefSeq) thyroid hormone receptor alpha-like isoform X1
  KO
K05547  thyroid hormone receptor alpha
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04080  Neuroactive ligand-receptor interaction
one04081  Hormone signaling
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04080 Neuroactive ligand-receptor interaction
    115143886
   04081 Hormone signaling
    115143886
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:one03000]
    115143886
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:one03310]
    115143886
Transcription factors [BR:one03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    115143886
Nuclear receptors [BR:one03310]
 1. Thyroid hormone like
  1A. Thyroid hormone receptor (THR)
   115143886
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 115143886
NCBI-ProteinID: XP_029540187
LinkDB
Position
LG16:complement(1285274..1486935)
AA seq 422 aa
MEHMPKEQDPNLSEGEEKLWIDGPKRKRKNSSCSVKSMSEMNGYGQTGSESTGYIPSYLE
KDEPCVVCGDKATGYHYRCITCEGCKGFFRRTIQKNLHPAYSCKYDGCCIIDKITRNQCQ
LCRFKKCIAVGMAMDLVLDDSKRVAKRRLIEENREKRKKEEMVKTLQNRPEPTGSEWELI
RMLTEAHRHTNAQGSHWKQKRKFLPEDIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITR
VVDFAKKLPMFSGLPCEDQIILLKGCCMEIMSLRAAVRYDAESETLTLSGEMAVKREQLK
NGGLGVVSDAIFDLGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTSSDKIEKCQETYLLA
FEHYINYRKHNIPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFEDQ
EV
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggaacacatgcccaaggagcaggaccctaacctatcagagggagaagagaaactgtgg
atcgatggcccgaaaaggaaaagaaagaacagttcatgttctgtgaagagcatgtctgaa
atgaatggatacggacagactgggtcagagagtacagggtacatccccagctacctggag
aaggatgaaccgtgcgtggtgtgtggagacaaggccactggctaccactaccgctgcatc
acctgtgagggctgcaagggtttctttcggcggacaattcagaagaacctccaccccgcc
tactcctgtaagtacgatggctgctgcatcatcgacaagatcacccgcaaccagtgccag
ctgtgccgcttcaagaagtgcatcgcagtgggcatggccatggacctcgtcctggatgac
tctaagcgggtggccaagcggcgtctgatcgaggagaaccgggagaagaggaagaaggag
gagatggtgaagactctgcagaaccgtccggagcccaccggctcagagtgggagctgatc
cgcatgctgaccgaggcccaccgccacaccaatgcacagggctcccactggaaacagaaa
cgcaagttcctgccagaggacataggtcagtctcccgtggcccccacgtcggacggagac
aaggtggacctggaggccttcagtgagttcaccaagattatcacccctgccatcacccgc
gtcgtcgactttgccaaaaaacttcccatgttctcggggctgccttgtgaggaccagatc
atcctattgaaaggctgctgtatggagatcatgtcgctgcgcgccgccgtgcgctacgac
gcagagagcgagacactgaccctgagcggcgagatggctgtcaagcgggagcagctgaag
aacggcggcttgggcgtggtgtcggacgccatcttcgacctgggcaagagcctggcgcag
ttcaatctggacgacacggaggtggcgctgctgcaggctgtgctgctcatgagctcagac
cgctcgggcctcacgagcagtgacaagatcgagaagtgccaggagacctacctgctggcg
tttgaacactacatcaactaccgcaaacacaacattccccacttctggcccaagctgctg
atgaaggtgacggacctgcgtatgatcggggcgtgccatgccagccgcttcctccacatg
aaggtggagtgtccaactgaacttttccccccgctcttcctggaggtcttcgaggaccag
gaagtgtga

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