Oncorhynchus nerka (sockeye salmon): 115143900
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Entry
115143900 CDS
T07952
Name
(RefSeq) tax1-binding protein 1 homolog B-like isoform X1
KO
K21348
calcium-binding and coiled-coil domain-containing protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115143900
04137 Mitophagy - animal
115143900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115143900
03029 Mitochondrial biogenesis [BR:
one03029
]
115143900
Membrane trafficking [BR:
one04131
]
Autophagy
Xenophagy
Cargo receptors
115143900
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
115143900
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SKICH
Rod_CreS
DUF745
CENP-F_leu_zip
Rab11-FIP3
KASH_CCD
Par-4_C
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
115143900
NCBI-ProteinID:
XP_029540205
LinkDB
All DBs
Position
LG16:2279172..2290810
Genome browser
AA seq
777 aa
AA seq
DB search
MELSTNFSQVVFQEIPNSYVSNVALTCCYTLTAAIQPNPRDWVGIFKVGWSTTKDYHTFV
WVEPSLDLIGLEPVRKKVLFTAYYLPKDDSAFYQFCYVDSNGQVRGASTPFCFKTPGEQS
TDCSLENDLLVIITQEKVEQREREKEELVMELGQLKEQNETLRSALKEQQQEIDHLKLSN
EELYQADGNTENARKHEELTQNTKLMDDSHRGQEEQVDKSEREKEELTMELGQLKEQNES
LTCALKEQQQEIDHLKESKKELVQLVSKLEKQQENTREHEELAQNFKSLDESQRGQESLT
PIHDKYLGNLVSKHVTASLTPICEKYERALIKIKQLKKEREVLRGKVEVQIVEIAQLSPR
LKESERESHRLKAHIQLLQVDLQSSKKEKKCSALKEQQQQESKEELVQLVSKLEQQQQNT
REHEELAQNAKSMDESQRGQESLTTICEKYEQALIKIKQLKKEGEELKGKIEVQSVEIAS
LSPRLKESEQESHKLKDHIQLLQVDLQSSEKEKEKLSAALHRVCGVTHDLHDLKTGNKAL
RRSLSEQEQQPLQMVDSDWKEQYQALLGQLEEAQTLLHKELQASNNTRKRAEQAERELEE
LKECMESTAMTSDQTKQKSSKLEMQLSELNKIIEEKENMAEIAKVEKEELSRENQDLKRD
IERLRKEVDDVQAAPVPMQHPNPYGSSTDPTPNKEQQQEALADSLHSWNPYETPGTATNL
EEELSLECRHCHESFPGITRDELELHEHSHRVCPFCMLICDGMEQALYEDHVYSHEV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggaattgtcaacaaacttttcccaggttgtgtttcaggaaatccccaactcatatgtg
tcaaatgttgccttgacttgctgctacactctgacagcagcaatccaaccgaatcccaga
gactgggtggggatattcaaggtgggctggagcaccacaaaggattatcacacatttgtg
tgggtagaaccatcattggatctgataggactggagccagtcagaaaaaaagtgcttttt
actgcatactacttgccaaaggatgactcagcgttctatcagttctgctatgttgatagc
aatggccaagtgagaggagccagcacccccttctgttttaaaaccccaggggaacaaagc
acagactgcagccttgaaaatgacctcttggttatcataactcaggaaaaagtagagcaa
cgtgagagggagaaagaagagctggtcatggagttggggcaactgaaagaacaaaatgag
actctgagaagtgctctgaaagagcaacagcaagagattgatcacctcaagctgtcaaat
gaggaactataccaggcagatgggaacacggagaatgcaagaaagcatgaagaactgaca
cagaacactaaactaatggatgactcacacagagggcaggaggaacaggtggacaaaagt
gagagggagaaagaagagctgaccatggagttggggcaactgaaagagcaaaatgagagc
ctgacatgtgccctaaaggagcagcaacaagagattgatcacctcaaggaatccaaaaag
gaactggtacagttagtgagcaaactggagaaacagcaagagaatactagagagcatgaa
gaactggcacagaatttcaaatcattggatgaatcacagagaggacaggagtctctgacc
cccattcatgacaaatatttggggaatttagtgtcaaaacatgtgacagcttctctgact
cctatttgtgagaaatatgaaagagcgttgatcaagatcaaacagctaaagaaagaacga
gaggtgttaagaggaaaggttgaggtccagattgtggagatcgcacagctgagcccaagg
ctcaaagaatctgagcgggagtcacacagactgaaggctcacattcagcttttacaggtg
gatctccagagcagtaagaaagagaagaagtgttctgccctaaaggagcaacagcaacag
gaatccaaagaggaactggtacagttagtgagcaaactggagcagcagcaacagaatact
agagagcatgaagaactggcgcagaatgccaaatcaatggatgaatcacagagaggacag
gagtctctgacaactatttgtgagaaatatgaacaagcgttgatcaagatcaaacagctg
aagaaggagggagaggagttgaaaggaaagattgaggtccaaagtgtggaaattgcatcg
ctgagcccaaggctcaaagaatctgagcaagagtcccacaaactgaaggatcatattcag
cttctacaggtggatctccagagcagtgagaaagagaaggagaagctttctgcagcgctg
cacagagtgtgtggtgtcacacatgatctacatgacctgaagactgggaacaaggcatta
cgtagaagcctgtcagagcaggagcagcagccactgcagatggtggacagtgattggaag
gagcaataccaagcccttcttggtcagctggaggaggctcagacactgttgcacaaggag
ttgcaggcttccaacaatacccgcaaacgtgcagagcaagcagaaagggaactggaggag
ctcaaggagtgcatggagagcacggccatgacgtctgatcagacaaagcagaagagcagc
aaactagagatgcaactttcagagttaaacaaaatcattgaggagaaagaaaacatggca
gagatcgctaaagtagagaaagaggagttgtccagagagaatcaggatctcaaaagagat
attgaaagacttcgcaaggaagttgatgatgtccaggctgctccagtgcccatgcagcat
cccaacccttatggctcttcaactgaccctacccccaataaggagcagcagcaagaggca
ctggctgactctctccactcttggaacccatatgaaaccccaggcacggctacaaacctg
gaggaagagttgtccttggagtgtcgtcactgccatgagtccttccctggcatcacccgg
gacgagctggagctgcacgagcacagccacagagtgtgccccttctgcatgctcatctgt
gacggaatggaacaggctttatatgaagaccacgtctacagccatgaggtgtag
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