KEGG   Oncorhynchus nerka (sockeye salmon): 115143912
Entry
115143912         CDS       T07952                                 
Name
(RefSeq) chondroadherin-like
  KO
K06248  chondroadherin
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04510  Focal adhesion
one04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115143912
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115143912
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:one00535]
    115143912
Proteoglycans [BR:one00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    115143912
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_1 LRR_5 LRRNT LRR_14 LRR_9 LRR_LRWD1 LRR_NXF1-5 LRRCT
Other DBs
NCBI-GeneID: 115143912
NCBI-ProteinID: XP_029540236
LinkDB
Position
LG16:2561747..2578868
AA seq 363 aa
MPCVSFLLVGTCLLVLGPAVWGAPSQCPAQCHCHGDLQHVICDNVGLKKIPQVSEATRLL
NLQRNNLGSLPTGSFASSKGLISLHMQHCQLHEIGGQAFKGLKKLIYLYLSNNEITSIKP
GAFEDLTELTYLYLDGNHISDLPKGIFSPMINLFILQLNDNKLRDIKPGTFAGAKDLRWL
HMSGNEMNSLQPGSLDDVENLAILHLDRNRLSTYPGLAMSKLRVVEELSLAKNPLRSIPD
NAFQSFGRYMEKLNLDGMGLEKFSDAAFNGVTAIKSLHLDNNKLKSLPNSLEFTTITNLT
LSNNPWSCTCMLAPLRKWMDSSRQRPDALCASPSSQRGKQIRDSSAFSSCKVKTKRAKKG
TRH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgccgtgtgtgagcttcctgttggtggggacttgcctgctggtcctcggcccggctgtt
tggggcgctcccagccagtgcccggctcagtgtcactgccatggggacctgcagcatgtc
atctgtgacaacgtggggctgaagaagatcccgcaggtgtccgaggccacccgtctgctc
aacctgcaaaggaacaacctgggcagcctgcccactggctccttcgccagcagcaagggt
ctcatctcattgcacatgcagcactgccagctccatgagattggcggccaggccttcaag
ggactcaagaagctaatctacctctacctgtccaacaacgagatcaccagcatcaagcca
ggtgccttcgaggacctcaccgagctcacttacctctacctggatggcaaccacatcagc
gacctgcccaagggaatcttctcacccatgataaacctgttcatcctgcagctcaacgac
aacaagctgcgtgacatcaagccaggcaccttcgccggagccaaagacctgcgctggctg
cacatgagtggcaatgagatgaactcgctacagccgggctctctggacgacgtggagaac
ctggccatcctgcacctggacaggaacaggctgtccacctatcctggcctggccatgagc
aagctgagagtggtggaggaactgagcctggccaagaaccccctgaggagcatccccgac
aacgccttccagagcttcggacgctacatggagaagctgaacctggatggcatggggctg
gaaaagttctctgacgctgcattcaatggagtgacggccatcaagtctctgcacctggac
aacaacaagctcaagtccctccccaacagcctggagttcactactatcaccaacctcacg
ctctccaacaacccctggagctgcacctgcatgcttgcccctctgcgcaagtggatggac
tctagccgccagcgccctgatgcgctctgtgcatctccatcctcacagagaggaaagcag
attagagacagttctgccttcagcagctgcaaagtcaagacaaagagagccaagaagggc
acgcgccattaa

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