Oncorhynchus nerka (sockeye salmon): 115143917
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Entry
115143917 CDS
T07952
Name
(RefSeq) PH and SEC7 domain-containing protein 1-like isoform X1
KO
K12494
PH and SEC7 domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115143917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115143917
Membrane trafficking [BR:
one04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
115143917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
PH_9
PH
dCMP_cyt_deam_2
Motif
Other DBs
NCBI-GeneID:
115143917
NCBI-ProteinID:
XP_029540241
LinkDB
All DBs
Position
LG16:complement(2738627..2815017)
Genome browser
AA seq
1662 aa
AA seq
DB search
MSQSGKVIHLYVEVRSAPEQDGKGGLGGGVEGLGTGSDSAQDQPAGLLSQLACQTKCQTP
SKAPIHRLAHNFTHTQSPSRHKVSFQLHQGNGTQSPSISQQQSLPAALTHSPAFSGIGKT
TTPHKDSKGHGVGGNGKRSVVTFSYIEKANVKTVESPQNSACQRRCGEELSSPPSHPRNK
LGDPIWLGSPGSSCSSSPKLAFRSLGGHQQQPTGSPSLRHPVLDPVGIAATQRALEEFGF
GSPLFRSKIIHGLEQSPRGSRHNQQARCLSWAGGSPVQHHSACNNLHNNHAVDADRNRAI
CGPLPRSSASVQLSSHARQATLGMSPYSRPRSCMGLQAQSPHHWAGQDKALAGSPATQRQ
VHKPCNSRSSSQGTILQLKNKLGEGTVLNQLSCSKPSSPANSPEVARRLAKEATKVSSIL
AEVKRNSLTLHNALDEVERPNSACMSGEADSSVSNVQRQHLQHQTVKMNIPLHGQHTPAS
NDIDSHRAGNFLASSRTQNSNSPTTTNHGTQHGRGQAQSSILSDTVVGVGGSPALPSRFI
RPSLPPAETSSPLKDPRLLRAQLRVTESPTLHRCQPPQYTRDFWSFEPDERADFSCFDTG
DSAELARRLYIRQSVVEAPVSWTSWQPWSHLVEEESRNSSSSPIHGPGPGQQPLSVAQQK
RAEHRRREVLLLGPVVLDLPEEDEGLNGDGEEVHGPGQQRGLLRVEEPPEGEQIRVAGSS
SRSSSGVTGSLGERDCVSPESSQSSHQSNETGAATSGIQTDSGSAVPGPSLHSQRIARAK
WEFLFGTPAEEDASRGEKNTIEALTAPPSGQSSESPTLTPPTSLPLISANHEVQHVEVEL
VTPHPAVAGASPKTGIIRMTLKYSETDLDAVPLRCYRETDIDEVLLAEQEDADSAFGSNR
SVKSTSGTDSSPLGVCPYESTSAEEEEVEGEEEEEELEEEEVVSWASVRMQGDIKRQQQQ
QVISQLLKRPLDSFFDNLPALKSPVLLSGPRLAGTSEDSFSRHFESIMESLRAKGTSYGS
LDLDSEELLTSSTQTVLTFDLPTLTPEIQGGQMICQSARQIVKLSFAPLAHCERGTSLSD
SIVTVTADSDATRAPSSERLSSSPEDTPLRGGGGGARMLGSSWYSNPTFSFPRSVMSYSS
NPSLSFHREKACLATDSELDKDLSELLGLGSSDTLTNGNRANGEAAKRLAKRLFTLDGFR
KSDVARHLSKNNDFSCMVAEEYLHFFNFKGLAVDQALRAFLRQFSLMGETQERERVLAHF
SRRYLHCNPKLIPSEDGVHTLTCALMLLNTDLHGHNIGKRMSCTQFIGNLEGLNEGQDFS
KDLLKALYNSIKNEKLQWTIDEEEMRKSFSELGDTSQADSASKHKKSMASGGKPLVAMAQ
PSGALLYKNGFLVRKVHADSDGKRTPRGKRGWKTFYGILKGLILYLQKGVYRPDKQLSDE
DLKNAVSIHHSLAMRAADYSKRPNVFYLRTADWRVYLFQAPSTEQMQSWITRINTVAAMF
SAPPFPAAIGSQKKFARPLLPSSTSKLSQEEQVQSHETRFRAISTELAELRSYPPDRKVK
GRELEEYRQRDEYLEFEKTRYGTYAMLLRNKIRCGEDDLSVFEVQILEDNGLQRTHSSPT
LQDFSQASQGSSTKEPVGCSGMGKGSKHTEAQRYSYRQAVKK
NT seq
4989 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtctggaaaagtcattcatctgtatgtggaggtgaggtcagccccagagcag
gatgggaaggggggcttgggaggaggagtggaggggcttgggactgggagtgactcagca
caggatcagccagcggggcttttgtcccagctagcctgccagacaaaatgccaaactcct
agcaaagctccaatacaccgcctggcccataacttcacccacactcagtctccctccaga
cacaaagtgagcttccagctccaccaaggtaatggcacccaatcgcctagcatctcccag
caacagagtttaccagcagcactgacccactccccagccttttctgggattgggaagacc
accaccccacacaaagattccaaagggcatggggtggggggcaatggcaaacggtcggtg
gtcaccttcagctacattgagaaggctaacgtcaagacagtggagagcccacagaactca
gcctgtcagaggaggtgtggggaggagctgtcgtccccaccttcccacccccggaataaa
ctcggcgaccccatctggttgggtagtcctggctcctcatgcagctccagtcccaaacta
gcgtttcgttccctagggggtcaccagcagcagccgacaggctcccccagcctccgccac
cctgtcttggatcctgtcggtattgcggccacccagcgtgccctggaggagtttgggttt
ggttcccccctgttcaggagtaagatcatccatgggctcgagcagagtcccaggggctcc
cgccacaaccagcaggcccgctgcctgtcctgggccggcggttctcctgtccagcaccac
agcgcctgcaataatctccacaataatcacgctgtggatgcagatagaaaccgggctatt
tgcgggccattacccaggagctcagcctccgtccagctttcgtcccatgctaggcaggcc
actctgggcatgtctccttactcaagacccaggtcgtgcatggggctccaggcccagagc
ccacaccactgggcaggtcaggacaaagctttagcaggtagtccagccacacagagacaa
gtgcacaagccctgtaacagtaggtcctcctctcaagggaccatcctccaacttaaaaat
aaactaggggagggaactgtactgaatcagctaagttgtagcaaaccctcctccccagcc
aacagccctgaagtggcccggaggctagccaaggaggctactaaagtatcctctatttta
gcagaggtaaagaggaactcattgacattgcacaatgctttagacgaagtagagagaccc
aactctgcatgtatgtctggagaagctgacagttctgtctcaaatgtacaacggcaacat
ttgcagcatcagacagttaagatgaatatccctttacacggccaacacacaccagcgtcg
aacgacattgactctcaccgggctggaaactttttagcatcgtcacgcacacagaactca
aactctccaacaacaaccaatcacgggacacagcatggaagagggcaggctcagagctcc
attctatcagacacagtagtgggtgtaggagggtcccctgccctgccttcacgcttcatc
cgtccatctcttcccccagccgagaccagctcccctctgaaagaccccaggctgctgaga
gcccagctcagagtcacagaaagccccacactgcatcgctgccagccccctcagtacact
agagatttctggtccttcgagccggacgagagagccgacttctcctgctttgatacgggg
gatagtgccgagctggcccgtaggctctatatacgccaaagtgtggtggaagcccctgtc
agctggacctcctggcagccctggagccacctggtagaggaggagagcagaaactccagt
tccagccccatacacggacctggacctgggcagcagcccctaagcgtggcccagcagaaa
agagccgagcataggaggagggaggttctgctgctgggccctgtggtgctggacttgcca
gaggaggatgagggcctgaatggggatggggaagaggttcacggaccagggcaacagcga
ggcctgctgagggttgaggagcctccagagggggagcaaatcagggtagcaggatcctca
tcacgcagctccagcggggtgaccggtagcctgggggaaagggactgtgtgtccccagag
tccagtcagtccagccaccagagcaacgagacaggggctgccacctcagggatacagacg
gacagtggttctgcagtcccaggcccctccctccactctcaaaggatagctcgtgccaag
tgggagttcctatttgggacccccgctgaggaggatgccagcaggggggagaaaaatacc
atcgaggccttgacagctcctcctagtggccagtccagtgaatcccccactctcacgccc
cccacctccctccccctcatctcggctaatcatgaggtgcagcatgtggaggtggagctg
gtgactcctcacccagctgtggcgggggcgtcgcccaagacgggcatcatccggatgacc
ctcaagtactcggagacggacctggatgccgtgcccttgcgctgttaccgcgagaccgac
atcgatgaggtgcttttggctgagcaggaagacgccgactcagcatttggcagtaaccgt
agcgtgaaaagcacgtcgggtacagacagcagccccctgggtgtctgtccctatgagagc
acaagcgcggaggaggaggaggtggaaggagaggaggaggaagaggagctggaggaggag
gaggtggtgagctgggcctcagtgaggatgcaaggggacattaagagacagcagcagcag
caggtgattagtcagctgctgaagaggccgttggacagtttctttgacaacctcccggcc
ctcaagtcgcccgtcctgttgtcggggcctcgcctcgcaggcacctccgaggacagcttt
agccgtcattttgagagcatcatggagtcactccgcgccaagggcacgtcctacggcagc
ctggacctggacagtgaggagctgctgacctccagcacacagaccgtcctgacctttgac
ctccccacgctgaccccagagatccaggggggtcagatgatctgtcaaagcgcccggcag
attgtcaagctgagcttcgccccattggcccactgcgagagggggacaagcctatcagat
tccattgtcacggtgacggcagactcggatgccacgcgtgccccctccagcgaaaggctg
agtagtagcccggaagacacgcccctgagagggggagggggcggggcacggatgctgggg
agcagctggtacagcaaccccacattctccttccctaggtcagtgatgtcatacagcagc
aacccctccctctctttccacagggaaaaggcttgtctggcgacagactcagagctggac
aaggacctcagtgagctgctgggcctggggagcagcgacaccctcaccaatggtaaccgt
gccaatggggaggccgctaagcgcctggccaaacgcctcttcaccctggacggcttcagg
aagtccgacgtggcccgccacctcagcaaaaacaatgacttcagttgtatggttgcagaa
gagtatctacacttctttaacttcaagggtcttgctgtggaccaggctctgagagccttt
ctcagacagttttccctgatgggggagactcaggagagagagcgggtgctggctcacttc
tccaggagatacctgcactgtaaccccaaacttataccctctgaggatggtgtccatacc
ttgacctgtgccctgatgctgctaaacacagacctgcatggccataacattggcaaaagg
atgtcctgcacacagttcattggcaacctggagggtctgaatgagggtcaagacttttca
aaagaccttctgaaggccctgtacaactcaatcaagaatgagaagcttcaatggacaatc
gacgaggaggagatgcggaagtctttctcagagctgggggacaccagccaggcagactcc
gcctctaaacacaagaagagcatggccagcggcgggaaaccactagtggccatggcccag
ccttcaggagccctcctgtacaagaacggcttcctggtgcgcaaggtgcacgctgactca
gacggcaaaagaacaccgcgtgggaagagaggatggaagacgttctatggcattctgaaa
gggctgattctctacctacagaagggagtgtaccggccagataagcagctgtcggacgaa
gatctgaagaacgctgtgtccatccaccactctctggccatgagggctgccgactacagc
aagagacccaatgtgttctacctccgcaccgccgactggagggtctacctcttccaggca
ccaagcacagagcagatgcagtcgtggatcacacgcatcaatacggtagcagccatgttc
tcggcgccacctttccctgcagccattggttcacagaagaaatttgcccgacctctgctg
ccaagctccacctccaaactgtcacaggaggagcaggtccagtcccatgagactcggttc
cgggccatctccactgaactggctgagctgcgctcatatcctccagaccgaaaggtcaaa
ggccgcgagctggaggagtaccgccagcgagacgagtacctggagtttgagaaaacacgc
tacggtacctacgccatgctgctgcggaacaagatccgctgcggcgaggatgacctgtcc
gtattcgaggttcagatcctggaggacaacgggctgcagcgcacccattccagccccacg
ctgcaggacttcagccaggcctcccagggcagcagcaccaaggagccggtgggctgcagt
ggcatgggaaaaggctccaagcacaccgaggcccagagatacagctaccgccaggccgtc
aagaagtga
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integrated database retrieval system
