Oncorhynchus nerka (sockeye salmon): 115143949
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Entry
115143949 CDS
T07952
Symbol
nrap
Name
(RefSeq) nebulin-related-anchoring protein isoform X1
KO
K24421
nebulin-related-anchoring protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115143949 (nrap)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115143949 (nrap)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
LIM domain-containing proteins
LASP family proteins
115143949 (nrap)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nebulin
LIM
DUF6634
Motif
Other DBs
NCBI-GeneID:
115143949
NCBI-ProteinID:
XP_029540296
LinkDB
All DBs
Position
LG16:complement(5237053..5341794)
Genome browser
AA seq
1728 aa
AA seq
DB search
MQSCARCGFVVYPAEKINCIDQNWHKACFHCDVCKMVLTAKNFVSHKKRPYCSVHNPRNN
MFTSVYETPINAKKQAIASSKQDYQAKFEEQQTYSYSGTITNQEIVSVTQAQKTISDAEY
NKGEEKVSKYSSIAKTPEVLLAKSQGQINYVYTEEYEQQLGKGSFPAHLTPGYQVSKKAT
EMASGVKYRQMYEQEMKGKATSDAGAAEFSSARENAGNFSQIAYTEEYEQQRGKGSFPAM
ITPAYQLAKKAQAHASDLKYKKDLSKMKGSSHFHNLTSEDNLALKSARKINKIVSEVEYK
KDLENTKGHSINYCETPQYKNASKAAKFSSDNKYKEKYTNHMKGHYEGSEMDKNAVHAMN
VRKLASNIAYKQEYEQEKTDHVEYNYPATITPGYQSQRKLDPLKDKNYRQHIDQVKYSSV
TDTPDIVQARINAQQLSNVNYRQHIDQVKYSSVTDTPQIVQARINAQQLSNIKYKEDWEK
TKSKTCDIGLDTLTVKAAKASRDLASDIKYKESFMKNKDKTSNVSDSKTLHSLQASKMTS
EIEYKKNSKENQSQFSLSMDMVNLSHAKKAQALASDLDYRTKLHHYTILSDDIQVQQAKK
AYNLQSENQYRSDLTWMKGVGWEADGSLNVTQAKKAGELLSDKKYRQKVDNVKFTQVADT
PSIKHAKKSQELQSKLTYKAGNEQMMHQYTMDKDEPLFRQAKANADLLSGKVYKSSWEQQ
REKGFELRMDSLSILTAKAKRDLASNVKYKEKYEQTKGKMIGVKMVTDDSQMAHSALATR
LQSDRHYRKKYEDTKTKHSASLDMLTMTHAKKAQDLATETNYRTFLHKYTTLPGDMKVAW
AKKAYGLLSDKQYRSDRNWMKGVGWVAADFLDVKQAKKAGELVSEKKYRQHVSDLKFTSV
EDTPEMVQAKLSNKLALDRLYREKGEHMKHNYTLSGDLPEHVQAKLNAMNISETRYKESW
TKIRDGGYKLRLDAIPFQSAKASGNILSDHKYKEQFEKTKGHMIGLKGLENDMNMSHSVN
ASKLQSDIKYKQDSVNKRSQYHLSMDMLEMAHAKKAQTLASEQDYRLTLHQYTTQPDDMK
VQAAKRAYQLQSEKVYRSDLNYLRGVAWISTGALQMEGFKRATDLISEKNYRQQPYSFKH
TSVADSPDIVHAKLSNKLTNERLYKMKGENDRHNYTMTLERPEITQAKINAANFSETKYR
ESWHTLRAQGYKLTMQDIPFQAAKTSMDLASDVQYKHHHLLDKGKHIGARSILDDPRMLH
CMQMGRLTSEQEYRKDALSTSGQYHLNPDMINLVTAKNAQALASDQDYRKRLHAYTVLPD
DIKVQWAKKAYNLQSENLYKSDLNFMKGVAWDGVGAPQMELAKKAGELTSNKKYRQLPDS
LKFTQVADSPDIVHAKNSYLQCSERLYKSGDSDAMHKYTLHADDPDFIRARINAQQISNK
AYKASGDEMRSAGYDLRLDAIPFQTAKASTNIASDFRYKEAFVKEKGQQVGLLSVEDDPK
MVHSLAASKLQSCLGYKRQAQETRSQFKMHANQPVFQQAKKSQALASNQTYHQRLHDYTF
DPQQLNVQHAKQAYKLQSDVNYKSDLNWIRGVGWTPPGSHKVEMARRAAELGLAESVSTE
EAIAQYQHMMMMQQMEEQQQVSEPVETSKEFQQSGVNLDAMEILHVKRKKTIQTVKKSNS
SSMDSSVKKLMMSSNSAIESMMASTSVSAIENTVKMSTTSAASAIENA
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctgcgccaggtgtgggtttgtggtgtacccagcggagaagatcaattgtatt
gatcagaactggcacaaagcatgctttcactgtgacgtctgtaaaatggtgctcacagcc
aagaactttgttagccacaagaagcggccatactgctctgtacacaatccaagaaacaat
atgttcaccagtgtctatgagacccccatcaatgccaagaagcaagccattgccagcagt
aagcaggactatcaggctaagtttgaggagcagcagacctactcgtactcaggcaccatc
accaaccaggagattgtgagcgtgacacaggcccaaaagaccatcagtgatgcggagtac
aataaaggagaggagaaagtgtcaaaatattcctccatagccaaaacccctgaagtgctt
ctggccaaaagccaaggacagatcaattatgtctacactgaagagtatgaacagcagttg
ggtaaaggcagtttccccgcccatctcactcctggctaccaagtttcaaagaaagccaca
gagatggccagtggtgtgaagtaccgtcagatgtatgagcaggagatgaagggaaaggcc
acctcggatgctggggcagcagaattctcttctgccagagaaaatgctgggaacttcagc
cagattgcctacactgaagagtacgagcagcagagagggaagggcagtttcccagccatg
atcactcctgcctaccagcttgccaagaaagcccaggcccacgccagtgatctgaaatac
aagaaggacctgagtaagatgaagggctcatcccacttccacaacctgaccagtgaggac
aacctggccctgaagagcgcccgcaaaatcaacaagatcgtcagcgaggttgagtacaag
aaggaccttgagaacactaaaggccacagcatcaactactgtgagacgccccagtacaag
aatgcatccaaggctgccaagttcagcagtgataacaagtacaaggagaagtataccaac
cacatgaaagggcactatgaaggctctgagatggacaagaatgctgtacacgctatgaac
gtcagaaagctggcaagcaatattgcctacaagcaggagtatgagcaggagaaaactgac
catgtggaatacaactacccagccaccatcacaccaggctaccagagtcagaggaaactg
gatccactcaaggacaagaactacagacagcacattgaccaagtcaagtacagctcggtg
acagatacccctgacatcgtccaagccaggatcaacgctcaacaactcagcaatgttaac
tacagacaacacattgaccaagtcaagtacagctcggtgacagatacccctcaaatcgtc
caggccaggatcaacgctcaacaactcagcaatatcaaatacaaggaggactgggagaag
accaagtccaaaacatgtgacatcggcctcgacacgctgaccgtcaaggctgccaaagca
tctcgggacctggccagtgatattaagtacaaagagtccttcatgaaaaataaagataag
acaagcaatgtcagcgactccaagaccctgcactctcttcaggcttccaagatgaccagt
gagattgagtacaagaagaactccaaggagaaccagtcccagttcagcttgtccatggac
atggtcaacctgagccatgctaaaaaagcccaggcccttgccagcgacctggactacagg
acgaagctccaccactacaccatcctatccgacgacatccaagtacagcaggccaaaaag
gcctataacctgcagagcgagaatcaataccgttcagatctgacctggatgaagggagtt
ggctgggaggctgatggatctctgaatgtgacccaagccaagaaggctggagagcttctc
agtgataaaaagtaccgtcagaaagtggacaacgtcaagttcacccaggtggccgatact
ccctctatcaaacacgccaagaagagccaggaactgcagagcaagctaacgtataaggcg
ggcaacgaacagatgatgcaccagtacaccatggacaaagatgagccactcttcaggcag
gccaaagccaatgcagacctcctcagtgggaaagtgtataagagtagctgggagcaacag
cgagagaagggctttgagttgcgcatggactccttgtccatccttacagctaaggctaag
agagacctggccagtaacgtgaaatacaaggagaagtacgagcagactaaggggaagatg
attggggtgaagatggtcactgacgactctcagatggcgcactcggctctggccacccgg
ttgcagagtgatcgccactacagaaagaagtacgaggacactaaaaccaagcatagtgcc
tctttggacatgttgaccatgacccacgccaagaaggcccaggatctggcaactgagacc
aactacaggaccttcctgcacaagtacacaactctgcccggcgacatgaaggtggcctgg
gccaagaaggcctacggactactgagtgataaacagtacaggtcggatcggaactggatg
aagggcgtgggctgggtggcagcagatttcctggatgtgaaacaagcaaagaaggctggc
gagcttgttagcgagaaaaagtaccgtcaacatgtcagcgatctgaagttcaccagcgtg
gaggacactcccgagatggtccaggccaaactcagcaacaaactggccctagacaggctg
tacagggaaaagggggaacatatgaagcacaactacacactctccggagatctgcctgaa
cacgtgcaggccaagctcaatgccatgaacatcagtgagacccgctataaggagtcgtgg
actaaaatcagagatggtggctacaagctccgtttggatgccattcccttccagtcagcc
aaagcgtctgggaacatacttagtgatcacaagtacaaggagcagtttgaaaagaccaag
gggcatatgattggactgaagggactggagaacgacatgaacatgtctcactctgtgaat
gccagcaaactgcagagtgacatcaagtataagcaggactctgtgaataagcgctctcag
taccacctttctatggacatgttggagatggcccatgctaaaaaggcccagaccttggcc
agtgagcaggactaccggcttacactccaccagtacactactcaacccgatgacatgaag
gtgcaggccgctaagagagcctaccaactacagagcgagaaagtgtaccgctctgacctg
aactacctgcgtggtgtagcctggatcagcaccggggccctccagatggagggcttcaaa
agggccacagaccttattagtgagaaaaactaccgtcagcagccctactccttcaagcac
acatctgtcgcagactcaccagacattgtccatgccaaactcagcaataagcttaccaac
gagcgcctgtacaagatgaaaggggagaatgacaggcataactacacaatgacattggag
agaccagagataacacaggctaagatcaacgcggctaacttcagcgagaccaagtacagg
gagtcatggcacactctaagggctcagggctacaaactgaccatgcaggacatccccttc
caggctgccaaaacctcgatggatttagccagcgatgtccaatacaagcaccaccacctg
ctggataagggcaagcacatcggcgcccgcagcattctggatgacccgcgcatgctacac
tgcatgcagatgggccggctgacgagcgagcaggagtaccgcaaagacgcactttccacc
agcggccagtaccacctcaatccagatatgatcaatttagtgacagccaagaacgcccag
gctctggccagcgatcaggactacaggaagaggctccatgcgtacactgtcctacctgac
gatattaaagtccaatgggccaagaaggcctacaacctgcagagcgagaacctgtacaag
tcggatctgaacttcatgaagggcgtggcctgggatggtgtgggggcgcctcaaatggag
ttggcaaagaaagccggagaactcaccagtaataagaaatatcgtcaactgccagacagt
ctgaagttcacccaagtggcggactctccagacattgttcatgctaagaacagctacctc
cagtgcagtgagaggctgtataagtctggagactcggacgccatgcacaaatacacctta
catgcagacgacccagacttcatcagagcaaggatcaacgcccagcagattagcaataaa
gcctataaagcgtctggggatgagatgaggtcggcaggctacgacttgaggctggatgct
attcccttccagacggccaaggcttccacgaatatcgccagtgatttccgctacaaggaa
gcctttgtgaaggagaagggtcagcaggtggggctgctcagtgtcgaagatgacccaaag
atggtgcactccctggcagccagcaagctccagagctgcctggggtacaagaggcaggct
caagagacgcgctcccagttcaagatgcatgccaaccagcctgtgttccagcaggccaag
aagagccaagctctggccagcaaccagacctaccaccagaggctccatgactacaccttt
gaccctcagcagctcaacgtccaacacgccaagcaggcctacaagctgcagagtgacgtg
aactacaagtcagatctgaactggatcaggggtgtgggctggaccccccctggctcccat
aaggtggagatggcccggcgggctgcagaactgggcctggcagagagcgtgagcactgag
gaggccattgcccagtaccaacacatgatgatgatgcagcagatggaggagcagcagcag
gtgtcagaacctgttgagaccagcaaagagttccagcagtcgggagtcaatctagacgca
atggagatcctccacgtcaagaggaagaagaccatccaaacggtgaagaagtccaattcc
tcctccatggatagcagcgtcaagaagttaatgatgtcttccaactcagccatagagtca
atgatggcttccacctctgtctcagccattgagaacacagtcaagatgtccacaacgagt
gcggcatcggccatagaaaatgcttag
DBGET
integrated database retrieval system
