Oncorhynchus nerka (sockeye salmon): 115143960
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Entry
115143960 CDS
T07952
Name
(RefSeq) cadherin-related family member 1-like isoform X1
KO
K16501
cadherin-related family member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115143960
Cell adhesion molecules [BR:
one04515
]
Cadherins
Cadherin related
115143960
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GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF4064
Motif
Other DBs
NCBI-GeneID:
115143960
NCBI-ProteinID:
XP_029540322
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Position
LG16:complement(6323184..6477789)
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AA seq
886 aa
AA seq
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MKNVKKLHFSLLLVLVHVCFVETQADYAPFFYDNGPYSSNGNLALFSLTEDTPVGTEIYA
LNGTDPEGQEVRYGLSFEPGAKEYFRVEPKSGNITLVEQLDREILDSIEVLVSITDGRSK
VTEKVTVFVMDANDERPVFKNLPSFLDVPENSECGSSIYKVLAVDRDTGSGGSITFYLQT
NGQSSKFAIDRHSGVLRIKPGEMLDYERSTTHFITVVAKDGGGNYNGKEQVMSSSATLTI
NVIDTQDTPPSFVGTPYFGYVYEVSVPGSEIFTVFAKDGDLGMPKPIHYSLENGTDGVFS
INKTSGVISLLTYPIYLKREIFNMKVKASEVSPEGNLMDYGFTTVVIRVVDLNNHPPTFY
GENGPQNMFEMTMYEHPPEGEIIRGLKITVNDSDQGSNAKFNLRLVGPGRMLRVVPQTVL
NEAQVTILVEDSAAMDYEKFHFLTFKLLAVEMDTPERFSATADIIIHLLDTNDNAPKFSS
VYYIARIPENSPGNSNVVSVTATDPDSGFWGEVKYSIYGSGADLFLIHSASGIIYTQPWA
SLDAEVKSKYNFYVKAEDAEGKYSLAEVFVTVLDLNDHPPEFNENFLEKTMIIGALVKIE
AQDDDAEGPNNVIEYSIMKTDPENIFDINADTGEIKLKSYIKSMDIIQNITKQNDCTWSV
VVQAQDRGSPSFSTTTVVKIDITEATQLRGPWASFFVQSRDKPLHILGMIAGVISLMVVV
TVFISTIMFMRNKKSNRILPHRRIRRRNKPPVTFKFPNSGEKLLIQEPEVMVGVNCSNYN
IASGHPLPLNHNMNVVTGHHWSPNHNVSMVSGRHWPPPPPPNAPALPPLLPGGRPGDRQW
VVPTVLGTVAQIKPKRNRNRPVDSVNAALVSELKMRLDQRRLANCS
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgtcaagaagttacatttttcactgcttcttgtattagtgcatgtttgcttt
gttgaaacacaagcagactacgccccatttttctacgataatgggccctacagtagcaac
ggaaacctggcactcttcagtctgacagaggacactcctgtcggcacagagatctatgct
ctcaatggcaccgacccggaaggccaagaggtgaggtatgggttgagctttgaacccggt
gccaaagaatacttcagagtggagcccaagtctggaaacataactctggtggaacaactg
gacagagagattttagattctattgaagttcttgtcagtatcacagatggcagaagtaag
gtcactgaaaaggtcacagtgtttgtcatggatgccaatgatgaacgaccagtgttcaaa
aacctgccctcctttttggatgttccagagaactctgaatgtgggagcagtatctacaaa
gtgctggctgtggatcgggatacaggctctggaggctcgatcaccttctatctacagact
aatggtcaatccagtaagtttgccatagaccgacacagtggtgtgctgaggatcaagccc
ggggagatgctggactatgagaggtcgacaacacacttcatcacagtggtggccaaggat
ggtggtgggaattacaatgggaaagaacaggtgatgtcatcctctgccaccttgacaatc
aatgtgattgacacccaggacacgccccctagctttgtcgggacaccatatttcggatac
gtttatgaagtgtccgtaccaggttcggaaatattcacagttttcgccaaagatggagac
ctaggaatgcccaaaccaattcattattcccttgagaatggtacagatggtgtttttagc
atcaacaaaacaagtggtgtgatcagtctgctgacttaccctatctatctgaagagggaa
attttcaacatgaaagtcaaggcctctgaggtcagccctgaggggaaccttatggactat
gggttcaccacggtcgttatccgggtggtagacctaaacaaccacccccccaccttctat
ggggagaatggaccgcagaacatgtttgagatgaccatgtacgaacaccctccagaggga
gagatcatccgtggtctgaagatcacggtcaatgattctgatcaggggtccaatgctaaa
ttcaacctcagacttgttggtcctgggcggatgttacgggtggttccccagactgtgctc
aatgaggcccaggtaaccatcttagtggaggactctgctgccatggactatgagaaattc
catttcctcaccttcaagcttcttgccgtggagatggacacaccagaaagattcagcgcc
acagcggacatcatcatacatctcctcgacaccaacgacaatgctcccaagttctcctcc
gtttactacattgccagaatcccggaaaactctcccggcaactccaatgttgtgtctgtg
accgcaacagatccagattcaggcttttggggagaagtcaagtactcaatctacggctca
ggggctgacttgtttctgattcattcagcatcgggcatcatctacacccagccgtgggcc
agcctggacgcggaggtgaagtccaagtataatttctatgtcaaagccgaggacgcagag
ggcaagtacagcctggccgaggtatttgtgaccgtgctggacctcaacgatcacccgcca
gagtttaatgagaacttcctggagaagaccatgatcataggagcgctggtgaagatagag
gcgcaagatgacgatgcagaggggcccaacaatgtcattgagtactccatcatgaagaca
gacccagaaaacatattcgacatcaacgcagacacgggcgagatcaagctcaagtcctac
atcaagtccatggacatcatccagaacatcaccaaacagaatgactgtacctggtctgtg
gtggtccaggcccaagacagaggctcgccctccttcagcaccaccacggtggtcaagata
gacatcacagaggcgactcaactcaggggcccttgggcatcctttttcgtgcagagtaga
gacaagcctttgcacatcttaggtatgatcgctggtgtcattagtctcatggttgtggtg
acagtcttcatctccaccatcatgttcatgcgcaacaaaaagtccaacaggatcctaccc
caccgccgcatccggaggcgaaacaaaccacccgtgaccttcaagttcccgaactctgga
gagaaactcctaatccaagaaccagaggtcatggtgggggtcaactgtagcaactataac
atagcaagcggacaccctctgcctctaaaccacaacatgaatgtggtgactggacaccat
tggtctccaaaccacaatgtgagcatggtgagtggacgccattggccaccaccaccaccg
cccaatgcccctgcccttcccccacttctccctggggggaggcctggggacagacagtgg
gtggtaccgacagtattgggcacagtagcacagatcaagcctaagaggaacaggaacaga
ccagttgacagtgtgaatgcagcactggtgtctgagctcaaaatgagactggaccagagg
aggttggcaaactgctcttag
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