Oncorhynchus nerka (sockeye salmon): 115143961
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Entry
115143961 CDS
T07952
Name
(RefSeq) ATP-citrate synthase-like isoform X1
KO
K01648
ATP citrate (pro-S)-lyase [EC:
2.3.3.8
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00020
Citrate cycle (TCA cycle)
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
115143961
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115143961
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.8 ATP citrate synthase
115143961
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115143961
Exosomal proteins of bladder cancer cells
115143961
Exosomal proteins of melanoma cells
115143961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synth_N
Citrate_bind
Citrate_synt
Ligase_CoA
CoA_binding
ATP-grasp_2
Succ_CoA_lig
ATP-grasp_5
Motif
Other DBs
NCBI-GeneID:
115143961
NCBI-ProteinID:
XP_029540324
LinkDB
All DBs
Position
LG16:complement(6494965..6643002)
Genome browser
AA seq
1112 aa
AA seq
DB search
MSAKAISEQTGKEFLYKHICTSAAVQNRFRYANVTSETDWDRLTQDHPWLLTERLVVKPD
QLIKCRGKLGLVGVNLDLVGVQEWLKPRLMRETTVAKAKGILKNFLIEPFVAHTQEEEFY
ICIYATREGDHVLFHHEGGVDVGDVDAKAQRLLVGVDDKLSEDSVKEQLFMHVPEDKKEV
LVSFVVGLFNLYEDLYFTYLEINPLVVNQDGVFVLDMAAKIDATADYICKAKWGDVEFPP
PFGREAYPEEAYIADLDAKSGASLKLTILNPLGRIWTMVAGGGASVVYSDTICDLGGVDE
LANYGEYSGAPSEQQTYDYAKTILSLMTREEHHEGKVLIIGGSIANFTNVAATFKGIVRA
IKDYQGPLKENGVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIYVFGTETHMTAIVGMALG
HQPIPNQPPVAAHTANFLLNSSTNSATPASTRTASFSEPRAANDATLAKKPKAGIPAAAP
HYPWLWPVKDEFTGDRYVKATMLFSRNTKAIMWGMQTRAVQGMLDFDYVCSRDEPSVAAI
VYPFTGDHKQKFYWGHKEILIPVYKNMADAMKKHPEVDVLISFASLRSAFDSTMETMQYS
QIHTIAIIAEGIPEAQTRKLIKRADENGITIIGPATVGGIKPGCFKIGNTGGMLDNILAS
NLYRPGSVAYVSRSGGMSNELNNIISHTTDGVYEGVAIGGDRYPGSTFMDHVLRYQDTPG
VKMIVMLGEIGGTEEYKICQGIKEGRITKPVVCWCIGTCATMFSSEVQFGHAGACANQDF
ETAVAKNQALRDAGAFVPKSFDELGDVIRTVYDELVANGTIVPAQEVPPPTVPMDYSWAR
ELGLIRKPASFMTSICDERGQELIYAGMPITEVFKEEMGLGGVLGLLWFQRRLPRYACQF
IEMCLMVTADHGPAVSGAHNTIVCARAGKDLISSLTSGLLTIGDRFGGALDAAAKQFSKA
FDSGMLPMEFVNKMKKDGKLIMGIGHRVKSINNPDMRVQILKDFVKGHFPATPMLDYALD
VEKITTSKKPNLILNVDGFIGVAFVDLLRMCGGFTRDEADEFVEIGALNGIFVLGRSMGF
IGHYLDQKRLKQGLYRHPWDDISYVLPEHMSM
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccaaagccatttcagagcagacggggaaggagttcctctacaagcacatctgc
acctcggcggccgtgcagaaccgcttccgctatgccaatgtcacctcggagacggactgg
gaccgcttgacgcaggaccacccatggctgctcactgagcgattggtggtgaagccagac
cagctgatcaagtgcagagggaagctgggcctggtgggtgttaacctagacctggtgggc
gtgcaggagtggctcaagccccgcctcatgagggagaccaccgtggcaaaagcgaaaggc
atcctgaagaactttctcattgaaccgtttgttgcacatacacaggaggaggagttctac
atatgcatctacgccacccgagagggcgaccacgtgctcttccaccacgagggaggcgtt
gatgtgggggacgtggacgccaaggcccagaggctgctggtgggagtggacgacaagctg
agcgaggactctgtcaaggagcagctcttcatgcatgtcccagaagacaagaaagaggtc
ctggtcagttttgttgtgggtctctttaacctgtatgaggacctttacttcacttacctg
gagatcaacccactggtggtcaaccaagatggcgtgtttgtcctcgacatggcagccaaa
attgatgccacggctgactacatctgcaaggcgaagtggggtgacgtggagttcccccca
ccctttgggagagaagcctaccccgaggaggcttacatcgcggatttggatgccaagagc
ggggccagtctgaagctcaccatcctgaaccccctgggaaggatctggacaatggtggca
ggtggaggagcctccgtagtctacagtgacaccatctgtgacctgggtggagtggatgag
ctggccaactacggagagtattcgggagcgcccagcgagcaacagacctacgactacgcc
aagaccatcctctcacttatgaccagagaggagcaccacgaagggaaagtgctgatcatc
ggaggaagcatcgctaacttcacaaacgtggcggccacgttcaaaggcatcgtcagggct
atcaaagactaccagggacccctgaaggagaacggagtcaccatctttgtgcgtcgcggc
ggccccaactaccaggagggcctgagagtgatgggagaagtaggtaagaccaccggtatc
cccatctatgttttcggcacagagacccacatgacggccattgtcggcatggcgctgggc
caccagccaatccccaaccagcctccagtagccgcccacacagccaacttcctgctcaac
tccagcaccaactccgccaccccagcatctaccaggacagcctccttctctgagcccaga
gcagctaacgacgccacgttagctaagaagcccaaagcgggcataccagcagctgctcct
cattatccgtggctgtggcctgtgaaggatgaattcacaggagaccgctacgtcaaagcc
accatgctgtttagcagaaacaccaaagccatcatgtggggcatgcagacgcgggcggtg
caaggcatgctcgactttgactacgtgtgctcgcgggacgagccctctgtggcggccatc
gtctatcccttcaccggggaccacaagcagaagttctactggggccacaaggagatcctg
attcctgtttataagaacatggccgacgccatgaaaaagcaccctgaagtggacgtgctt
ataagctttgcctcgctccgctccgcctttgacagcaccatggaaaccatgcagtactca
cagatccacaccatcgccatcatagctgagggcatccctgaagcccagacaaggaagctg
atcaagagggcagatgagaacggcatcacaatcatcggcccagccacggtgggaggcatc
aaacccggctgcttcaagatcgggaacacgggcggaatgctggacaacatcttggcctcc
aatctgtaccggccaggcagcgtggcctacgtgtcccgctcaggaggcatgtccaacgag
ctcaacaacatcatctcccacactacagatggcgtctacgagggcgtggccatcggaggt
gaccggtatccaggttcaacgttcatggaccatgtgctccgctaccaggacactccagga
gtgaagatgatcgtgatgcttggagagatcggaggcacagaagagtataagatctgtcaa
ggcatcaaggagggcaggataaccaagccggtggtgtgctggtgtataggaacctgtgcg
accatgttctcctcggaggtgcagtttggccatgctggagcctgtgcaaatcaggacttt
gaaacggcagtggctaagaaccaagctctgagggatgcaggagcctttgttcccaagagc
tttgacgaactgggtgacgtcatcaggacagtgtatgatgaactggtggccaatggaacc
attgttcccgctcaggaggttccacccccaacagtgccaatggactactcctgggcaagg
gagctgggtctgatccgcaagcccgcctccttcatgaccagcatctgtgacgagcgtggc
caggagctcatatacgcaggcatgcccatcacagaggtgttcaaggaagagatgggcctg
ggaggcgtgctgggcctgctctggttccaacgcaggttaccgcgctacgcctgccagttc
attgagatgtgcctgatggtgactgcagaccatgggcccgccgtatctggtgcccacaac
accatagtctgtgcccgtgccggcaaggacctaatctccagcctgacatccggcctgctc
accattggggaccgctttggaggagctttggatgctgcggccaagcagttcagcaaggcg
ttcgacagcggcatgctgccgatggagtttgtcaacaagatgaagaaggatggcaagctg
atcatgggtattgggcacagggtcaaatcgatcaacaaccccgacatgagagtccagatc
ctgaaggactttgtgaaggggcatttccctgccactccgatgctggattacgctctggat
gtggaaaagatcaccacctctaagaaacccaacctgatcctcaatgtggacggcttcatc
ggtgtggcctttgtggacctacttaggatgtgtggtggattcacacgagacgaagcggac
gagtttgtggagattggtgcactgaacgggatctttgtgctgggcaggagtatgggcttc
atcggtcattacctggaccagaagaggctaaaacagggcctgtaccgccacccatgggat
gacatctcctatgtgcttccagaacacatgtcaatgtaa
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