Oncorhynchus nerka (sockeye salmon): 115144012
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Entry
115144012 CDS
T07952
Name
(RefSeq) SUN domain-containing protein 1-like isoform X1
KO
K19347
SUN domain-containing protein 1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115144012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115144012
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
115144012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
115144012
NCBI-ProteinID:
XP_029540443
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All DBs
Position
LG16:complement(9594121..9619959)
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AA seq
1079 aa
AA seq
DB search
MDHSKVNSRAPPPENTGYTYSHSSSYSTTALDFEKEHRITPVLESPRMSRRSLRLHSTTG
LYGDDSLDSTLNHMYHSASFSAGGASRRDSKALKSRRSQQHSVSCSQSLLLTTPLKSQHG
SRQHNSSLHSVAASDASLLSSMLDKSCIQERTLVEGFWGLDEDSELKERTMTDSMCEANG
DINSAQTQTSMVNGSFCKDRTIHLDRNDALTAYSKHSSTAARSATNKQALTAPAASPSST
IYARDKSRKHRTGERGSHRSTITCVLVSFSDTCVRVSRRAAASVASVFSLLLQSVLLRSR
KEGTGVLWSALDTCLNHSRRAAAFTVCLVRLLIQAAVLKTGSVGRKVVNGAHSSYCGSMN
VNELGTEGKHMTLNGALCDDCKGKQRVETRIVQSSSRVCRSHHVLGELWLATAYSGYLLS
DQTLAYPHTLEMNESSSTFLVPCFLLLGWSPGSSVLWAGQKAGSAVRSAMRRMLSVLWLA
AVSPGKSATGAFWWLGTGWYHLATVMSLLNIFVLTRCLPKLLKLLLILLPFLLVLLALWH
WGPSSLLSVLPAINITEWRTAYSFSQTPLEPTKDSQPIMAQPPPAVSQPGSVLVSVDSER
LARLEHRLAQLWEKVERGGRRQENQHREVLSLYQSVREQLDTQTDKDSMGLWVSGLLEER
LLLLKRGMEKDAALRRELSQEIGEQYVVQQQGQESRLAQLEVLLQTLTAKTEEVQRRQAD
TSSATPALPPVPVQVNVGVDSESRDALLAEVQLLEATLGGIRQDLQGVMGCQGMCDRLDT
LHETVSEQVSAQVRTELRALFSRSEQVGESQTREKELPESLLQWLSERYVSGVDVHASLT
SLELSILQNVTLQLEKSRARQETHSTETVTQTVMHTVGAAGAGMSEEHVQLIVKNALKLY
SQDRTGLVDYALESGGGSILSTRCSETYETKTALMSLFGLPLWYFSQSPRVAIQPDVHPG
NCWAFQGSHGYLVIRLSMRIVPSAFSLEHIPKSLSPTGTISSAPRQFTVYGLDDEYQEEG
KLLGSYTYQDDEDALQTYPVTEENDKAYQIIEVRVLSNWGHPEYTCLYRIRVHGQPSVN
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggaccattcaaaagtgaactcacgtgccccacccccagagaacactggctatacctac
tctcacagctccagctactctacaacagccctggactttgagaaggagcacaggatcaca
cccgtcttagagtctcccaggatgtctcggcggagcctgcgtctgcactctaccactggt
ctctatggcgacgacagcttggactctactctcaaccacatgtaccacagcgcctccttc
agtgctggaggagccagtcgcagagattccaaggcgttgaagagcaggaggtctcagcag
cactctgtctcctgctcccagtctctgctcctcaccacgccccttaagagccagcatggc
tcccggcagcacaacagcagcctgcacagcgtggctgccagtgacgcctccctgctctcc
tccatgctggacaagtcgtgtatccaggagcgcacgcttgtcgaaggcttctggggcttg
gatgaagactctgaactcaaagagcggaccatgacagacagtatgtgtgaggccaacgga
gacattaactctgcacagacccagacctccatggtcaacggaagcttctgtaaggaccgc
acgatccacctggacagaaatgacgcgctcactgcctattccaagcactcctcaactgca
gcccgctctgccaccaacaagcaggccctgacagcccccgctgcctcaccttcctccacc
atctacgccagggacaaaagccgcaagcacaggacgggtgagcgaggcagccacagaagt
actataacgtgtgtgctggtgtccttctcggacacctgtgtgcgcgtgagcaggagggca
gcagcctctgtggcgtccgtcttctcactgctcttacagagtgtgctgctgaggtcacgt
aaagagggcacaggtgtcctgtggtcagctttagacacctgtctgaaccatagcaggagg
gcagctgccttcactgtgtgtttagtgagactgctcatacaggctgctgtgctgaagacg
ggcagtgtgggcaggaaagtggttaatggagctcactccagctactgcggaagcatgaat
gtaaatgagttggggactgaggggaaacacatgactctgaatggtgctctttgtgacgac
tgcaaagggaagcagcgcgtggagacgcgcattgtccaatcctcatcacgggtctgccgg
tcacaccatgtgttgggggaactgtggcttgccactgcttactcaggttacctattaagc
gatcaaactctggcctatcctcatacacttgaaatgaatgaatccagttcaaccttttta
gtcccttgttttttgttacttggttggtccccaggctccagtgtgttgtgggccgggcag
aaggctggctcagctgtgcggtccgcgatgaggaggatgctgtctgttctctggttggca
gctgtgtccccagggaagtcagcgaccggggcattctggtggctggggactggatggtat
catctggccaccgtcatgtcgctcctcaacatcttcgtcttgacacggtgccttcccaag
ctcctcaaactcctgctgattctgctcccattcctccttgtcctcctggctctgtggcac
tggggcccgtccagcctgctgtctgtgttgcctgccattaacatcactgagtggaggacg
gcctactccttcagtcagacccctctggaaccaaccaaagacagccagcccatcatggct
caaccaccaccagctgtctcacagccaggcagtgtgctggtgtctgtggactctgagcgc
ctagcccggttggagcacaggctggcccaactgtgggagaaggtggagcgagggggccga
aggcaggaaaaccagcacagggaggtgctgagtctctaccagtctgtacgagagcagctg
gacacccagacggacaaggacagcatggggctgtgggtgtctggccttctggaggagaga
ctccttctgctgaagagagggatggagaaggatgcagcactgcggagagagctgagtcag
gagattggagagcagtatgtggtgcagcagcagggccaagagtctcgtctggctcagcta
gaggtgctgctgcagacactgactgccaagacagaggaggtgcagaggaggcaagcagac
acttccagtgctacacctgcactgcccccagttcctgtgcaagtcaatgtgggtgtggac
agtgagtcccgtgatgccttgctggcggaggtgcaacttctagaggcgacgctggggggc
attaggcaggacctgcagggggtgatgggatgccagggcatgtgtgaccgcctggacaca
ctccatgaaacggtgtctgagcaagtgtcagcccaggtgaggacggaactgcgggccctg
ttctctcgcagcgagcaggtcggagagtcccaaaccagagaaaaggagctcccagagtcc
ctgctgcagtggctctctgagcgctatgtaagcggggttgatgtgcacgcctctctgacc
tccctggagctcagcatcctgcagaacgtgaccctgcagctggagaagagcagggccagg
caggagacacacagcactgagactgtcactcagactgtgatgcacactgttggagccgca
ggggccgggatgtctgaggagcatgtacagctgatagtgaagaatgctctgaaactctac
tcccaggatcggaccggcctggtagactatgctctggagtctggcggcggcagcatcctg
agcactcgctgctctgagacgtacgagacaaagacagcactgatgagtctgtttggcctc
ccgctctggtacttctcccagtctcctcgtgtggccatacagcctgacgtccatccaggg
aactgctgggcgtttcagggttctcatggttacctggtgattcgtctctccatgaggatt
gtgccctctgccttctcattggagcacatccccaaatccctttcaccaacaggcaccatc
agcagcgccccgcgccagtttaccgtctatggtctggatgatgagtaccaggaggagggt
aaattactgggcagctacacctaccaggatgatgaagatgcgcttcagacttatcctgtc
accgaggagaatgataaagcctatcagatcattgaggttcgagtgctgtccaactggggt
cacccggagtacacctgcctgtaccgcatcagagtgcacggtcagcccagtgtcaactga
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