Oncorhynchus nerka (sockeye salmon): 115144014
Help
Entry
115144014 CDS
T07952
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115144014 (vps35l)
Membrane trafficking [BR:
one04131
]
Protein recycling
Others
Retriever complex
115144014 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
115144014
NCBI-ProteinID:
XP_029540460
LinkDB
All DBs
Position
LG16:9572569..9585444
Genome browser
AA seq
972 aa
AA seq
DB search
MAAVQWHSRARRYESELQSCGLEVSPVEFSDYHPLKSITVTDSKSRRGARKGSTSSSSSS
SSSVAPDPLSSMLDGTDPLSMFAAASASESPPTLSQSSSTGDLGRGKRREKEDEVGVDFE
PWSSKRGEILARFTTTEKLSINLFMGSEKGKAPSLASSAVSEKVRTRLEELDDLEEGSQR
ELLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLI
TDILDTFGRLVYERIWSMCSDPRPLPDPSPDSFTADEVNDTAKETCLNWFFKIASIRELI
PRLYVEVALLKCNRFLTKCGIQETVPRLTDMIRGIGDPLVAVYARAYLCRIGMEVAPHLK
DSLNKNFFDLLGTFRQIHGDSVQNQLVLQRVEIPVYLTLYSPAIHWILQCVSYRAPEALL
TEMMERCKKLGNNALLLNSVMWAFRAEFIATRATDFIGMIKDCDEAGFPKHLLFGSLGRS
LACADPPEAERLPILNEAWKVITKVRSPQDYINCAEIWVEFTCRHFTKREVNTVLSDIIK
HMTPDRAFEDAYPQLQSVIRKILTYFHDFSVLFSMERFLPFMDMFQKDSVRVGVCLSIMD
VFIKHQQEPTRDPVILNALLHVCKTMHDSVNALTLEDEKRSLALLINGFIRMVSFGRDFE
QQLSFCVEARATFCNLEPVLVQLIHTVNQLAMETRRVMRGSHSRKTAAFVRACAAYSFIT
IPSLTSIFSRLNLYLLSGQVALANQCLSQADAFLKAAVSVLPEVPRSISIEGKLRSSEGF
LLDFINNFLSALLVVPDHPEAGVLFLVRGLLNMVQDYTWEDNSDAKVHVYISALPLLAAM
SQESYLYSIPKVDSNETLYGGDPKFLAEINKLCETLIGQVLDHLKTLGRDESVHRQGSLA
FSLFGCLLAHGDLRNNKLNQLAVNLWNLSHKQGYCNTRTSVRTLEFIKHQAQQPDMAHLS
DMLHRLTLQSRT
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtgcagtggcactctcgtgcacgcaggtatgagtctgaactgcagagctgt
ggcctggaggtttccccagtggagtttagcgactaccatcccctcaagtccatcactgtg
acagactccaagtcgcggaggggagcgcgtaaaggcagcacctcctcctcctcctcctct
tccagctctgtggcaccagatcccctgagctccatgctggatggaactgaccccctgtcc
atgtttgctgcagcctctgccagcgagtcccctccaaccctctcacagagcagctccact
ggggacttgggtagaggaaagaggagggagaaggaggatgaggttggagtggactttgaa
ccgtggtcatccaaacggggagaaatccttgccaggttcactaccacggagaagctctcc
attaatctcttcatgggctcagagaaaggcaaggctcccagtcttgcctcctctgctgta
tcggagaaggtgcgaactcgcctagaggagctggatgacctggaagaggggtctcagcgg
gagctgctgaatctgtcccagcaggactatgtgaaccgtatcgaggagctcaaccagtct
ctaaaagaggcctgggcctccgaccagaaggtcaaggccctcaagatcgtcatccagtgc
tccaagctgctgtcagacacagctgtgattcagttctacccaagcaagtttgtcctcatc
acagacattctggacacctttggacgtctggtgtatgagaggatctggtccatgtgttct
gaccctcgccccctaccagatccctctccagactcctttacagctgatgaagtgaatgac
acggccaaggagacctgcctcaactggttcttcaaaattgcctccatcagagagctcatc
ccacgactatatgtcgaggtagctctcctgaagtgtaaccgtttcttgaccaagtgtggg
atccaggagacggtgcctcgcctcacagatatgatccgggggataggggaccccctggtg
gccgtgtatgcccgggcctacctctgtcggattgggatggaggtggctcctcacctgaag
gacagcctgaacaagaacttctttgacctgctggggacgttccgtcagatccacggcgac
agtgtccagaaccagctggtcctgcagagggtggagatccccgtctacctgaccctctac
tcccccgccatccactggatcctgcagtgtgtctcctacagagcaccagaggccctgcta
actgagatgatggagagatgcaaaaaacttgggaataatgccctgctgctgaactcggtg
atgtgggcgttcagggcggagtttatcgcgacgagagccaccgacttcatcggcatgatc
aaggactgtgatgaggcaggattccctaagcacctgttgtttggctctctgggccgcagc
ctggcctgtgctgaccctcctgaggcggaaaggctgcccatcctcaatgaggcctggaag
gtcatcaccaaagtgcgaagtccacaggattacatcaactgtgctgagatctgggtggag
ttcacctgtcgtcacttcactaaacgtgaggtcaacactgtgctctctgacatcatcaag
cacatgaccccagaccgggcctttgaggatgcctatcctcagcttcagtccgtgatacgg
aagatcctcacctactttcatgacttctctgtcctcttctccatggagcgtttccttccc
ttcatggacatgttccagaaggacagcgtcagagtgggggtgtgtctctccatcatggac
gtcttcatcaaacaccagcaggagcccactagagatcctgtcatcctcaacgctctactc
cacgtctgcaagaccatgcacgactctgtcaatgcgctgacgctggaggacgagaagaga
tctctggccttgttgatcaatggcttcatacgcatggtgtcgtttggccgtgactttgag
cagcagctgagtttctgtgtggaggcccgggccaccttctgtaacctggagccagtgttg
gtgcagctcatccacactgtgaaccagctggccatggagacgaggcgtgtgatgaggggg
agccactcccgcaagactgctgcttttgtcagggcatgtgctgcatacagcttcatcacc
attccctccctcaccagcatcttcagccgcctcaacctctacctgctgtctgggcaggtg
gccctggccaaccagtgtctttcccaggcggatgcattcctgaaggcagcggtcagtgtg
ttgccagaggtgccacgcagtatcagtatcgagggcaaactgcgctcttctgagggcttc
ctgcttgacttcatcaacaacttcctgtcagcactactagttgtgccggaccacccagag
gcaggggtgttgttccttgtgcgtgggctgctcaacatggtgcaggactacacctgggag
gataacagtgacgccaaggtccatgtctacatcagcgccctgccactactggctgccatg
agtcaggagagctacctctactccatccccaaagtggactcgaatgaaacactttatgga
ggagatcccaagtttttggcagagatcaacaagttatgtgaaactctgattggacaagtg
ctggaccacctcaagaccttgggtagagatgagagtgtccatagacagggtagtctggcc
ttctctctgtttggctgcctcctagctcacggggacctacgcaacaacaaactcaaccag
ctggctgtcaacctgtggaatctgagccacaagcagggttactgcaacacacgcacctcc
gtgcggacattagagttcatcaagcaccaggcccagcagccagacatggctcacctttca
gacatgctccaccgcctcaccttgcagtccaggacctga
DBGET
integrated database retrieval system
