Oncorhynchus nerka (sockeye salmon): 115144027
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Entry
115144027 CDS
T07952
Name
(RefSeq) myoferlin-like isoform X1
KO
K22125
myoferlin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115144027
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
Ferlins
115144027
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
PI3K_C2
Pex24p
Motif
Other DBs
NCBI-GeneID:
115144027
NCBI-ProteinID:
XP_029540498
LinkDB
All DBs
Position
LG16:complement(10850070..10873227)
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AA seq
2053 aa
AA seq
DB search
MLRVVVESAKGLPKNKLGSTPDPVASIIFKDEKKKTKSIDSEVNPVWNEVFQFDLKGSAL
DSSSYIDVIVKDYETIGKDKFLGSAKISLKDLATGQVKSSPSQDVALVNEKGQAIGATVS
LLIRYDPPANAAPKSNDPQEGATAGDSVEGGGEERDEDFIDGGQSGGAGGVSSNGQPGNP
NQRLVRSTRKQNRPLANKPQDFQIRVRIIEGRQLPGNNIKPVVKVNVCGQTHRTRIRRGN
NPFFDEMFFYNVNMLPLDLFDQSISFRVYDSFSLRADSLMGDFKVAIGFIYDGPDHSVMR
KWLLLNDPDDYSSGARGYLKVSMFIVGMGDEPPVEKRDVSDDQDDIESNLLMPAGVTLRW
VTLSLKVFRAEDIPQMDDAFAQSVKDMFGGDGNKKNLVDPFVEARFAGKKLCTQVIEKNA
NPEWNQMLNLQVKFPSMCEQIKLTIFDWDRLTRNDSIGTTYLNLGKIASSGGEIEDEHAG
YGFSQSRKTGESEVGFLPAFGPCYVNLYGSPREFTGLPDPYEELNYGKGEGVAYRGRILV
ELSTKLEGKPDKTVDVIPSDDILVAQKYQRRRKYCLCAVFHSASMLQEPGEPIQFEVSIG
NYGNKLDTTCKPLSSTTQYSCAVFDGNHYYYLPWADTKPVVVITSFWEDISHRLDAVNII
LYISERLQSNITAMKTAILAKASDNCLAEIWLRLVNQLIDDLDRFKVPDLEGQSNLTALD
IQIKKLRDNALQTIMEGADRMRDEPADIKDTLVDIEGWLDKLKQLADEPQNSMPDVIIWM
LRGETRVAYSRIPAHQLLYSTYSEQACGQFCGRTRTILMQYPMDKNKGLKVPVQIRVNVW
LGLSAHEKKFNTFSEGTFSVFAELYENQAYMLGKWGTTGLGLRHKYSDVTGKLKLKQEYF
MPPRGWEWEGEWFIDPEKGLLTEADAGHTEFIDEVFQNETRFPGGEWKPAAEPYADVNGE
KTQNPGEMECPAGWSWEAEWAVDDNRAVDEKGWEYGITIPPDEKPKSWVPAEKMYHVHRR
RRVVRPRKRSAAGTTTEKRDQGDPEGWEFSSLIGWKFHRKVRSTDTIRRRRWRRKMAPAD
RLGASAIFKLEGALGVDTDEKRKDETVGASKPFGANTPTVSCSFDRSHVYHLRIYIYQAR
NLVAMDKDSFSDPYAHVSFLHMSQTTETMKATLNPTWDQTLIFHNMEIYGDPQNIARYPP
DVVLEFYDNDQVGKHELLGRSTCVPLVKLNPGMDQTPQLLWSPITHKGRRAGEVLVAAEL
ILTDKGIGMDLPLVPPKRAENLYMVPQGIRPVVQLMAIEILAWGLRNMKTYQLATVSSPS
LVVECGGEVVQSAVIKNMKKSPNFPGSVLFLKVLLPKEEMYTPPIVLKVIDHRPFGRKPV
VGQCTIDTLEEFRCDPYIIQKSSMSSKVALMAASPRDIRIDMEDGRPLLETRLAEKEKET
VDWWSKFYASIGDQEKCRPYLQKGYDTLKVYDNELEEIPEFKQLTDFCRTFKLKRGKNED
GDDDPSVVGEFKGSFKVYPLSDDPGVALPPRQFRELPKSGPQECLVRIYVVRGIDLQPKD
NNGQCDPYMKIALGKKSIEDRDNYLPNTTNPVFGRMFEMTCFLPEDKDLKISVYDYDLLS
RDEKVGETVIDLENRFLSRFGSYCGLPQTYCISGINQWRDQLKPSQILQNLARLKGVPPP
MTEDNGNTLSFNGEQYTLAQFEANNEIHQHLGPANERLPLHVLRTQGLVPEHVETRTLFS
SFQPQLSQGRLQMWVDVYPKSMGLPGPPFDIAPRKAKKYFLRAVVWNTTDVILDETSITG
EHMSDIYVKGWMPGMEEDKQKTDVHYRSLDGDGNFNWRFIFGFEYLPAEQLCLVSKKEHF
WSLDKTEFRIPPKLIVQIWDNDKFSLDDYLGTVELDLCNLTPPAKTPEKCSLGMMEVMLD
AEPHKSDLTNSLFAQQSVRGWWPCVIEQDGKEVLGGKVEMTLEIVAENEVDGKPAGKGRD
EPNMNPKLDFPNRPDTSFFWFTNPCKTMKFILCRKFKCMFIGLILLILVLLFIGILLYSL
PNYISMKIVKPFQ
NT seq
6162 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgggttgtggtagaatctgctaaaggtctgcctaaaaataaacttggaagtaca
ccggatcccgtagcatctattatttttaaagatgagaagaagaaaaccaaatcaattgac
agtgaagtaaacccagtttggaatgaagtctttcagtttgatttgaagggctctgcgctt
gattcctcatcttacattgatgtgattgtgaaagactatgaaactattgggaaagataag
tttctaggctctgcaaaaatttcactgaaagaccttgcaactggtcaagtcaaatcctct
ccatctcaagatgtggctcttgtcaatgaaaaggggcaggctattggggccacggtaagc
cttttgattcgctatgaccctccagccaatgccgctccaaagtcaaatgacccacaggaa
ggagccacagctggtgattctgtggaaggtggtggtgaagagagggatgaggactttatt
gatggaggacagagtggcggtgcagggggagtctcctccaatggtcagcctgggaaccct
aaccaaagactggtcaggagtaccaggaaacagaaccgtcccctggccaataaaccccag
gactttcagatccgtgtcaggatcatagaggggcgacagctccctgggaataacatcaaa
cctgttgttaaggtcaatgtttgtggacagactcacagaacaaggataaggaggggaaac
aatcccttctttgatgagatgttcttttacaatgtcaacatgttaccattagacctattc
gatcaatctatcagctttcgggtgtacgactccttctctctgagagctgacagtctcatg
ggggacttcaaggttgctattggctttatttatgacggaccagatcactccgtgatgagg
aagtggctccttctgaatgaccctgatgactacagctcgggggccaggggatacctcaaa
gtcagcatgttcatagtcgggatgggagacgaaccaccggtcgagaagagggacgttagc
gatgaccaggatgacatagagagtaacctgctgatgccagcgggggtcactctgcgatgg
gtcaccctgtctctcaaagtgttccgggctgaggacattccccagatggatgatgccttt
gcccagtcagtgaaggatatgtttggaggggatgggaacaagaagaatctagtagaccct
tttgtagaggcccgcttcgctggcaaaaagctgtgcacccaagtcattgagaagaatgcc
aacccagaatggaaccaaatgctgaatcttcaggttaagttcccttccatgtgtgaacaa
atcaaactgaccatatttgattgggatcgcttgactcggaatgactcaattggcaccacc
tacttgaatctgggcaagatagcgtcctctggtggtgaaattgaagacgaacatgcggga
tatgggttctctcaatcacggaagactggggagtctgaggtgggttttctgccagccttt
gggccttgctatgtcaacctgtatgggagtcccagagagtttactgggcttcctgaccct
tatgaagagctgaactatggcaagggtgaaggggtggcctatcgaggacgaatcctggtt
gagctctcgactaaactggaaggcaaacctgacaagactgtggatgtgatccctagtgat
gacatcttggtggcccagaaataccagcgtaggaggaagtactgtctgtgtgccgtgttc
cacagtgccagcatgctccaggagcctggcgaaccaatccagtttgaggtcagcatcggc
aactatggcaacaaactggacaccacctgtaaaccactgtcctccactacccagtacagc
tgtgctgtgtttgatggtaaccactactattacctgccctgggctgacacaaagccagtg
gttgtcatcacatcattctgggaggacatcagtcaccgtttggatgcagtcaacatcatt
ctgtacatatctgaacgcctgcaatctaacatcactgcaatgaagacggccatcttggct
aaagcttctgacaactgtctggcagagatctggctgaggctggtgaatcagctgatcgac
gatcttgaccgtttcaaagttccagacctggagggccaatccaacctgactgccctggac
atccagatcaagaagctgcgggacaacgccctgcagaccatcatggagggggccgaccgt
atgagagacgagcccgccgacatcaaggacaccctggtggacatcgagggctggctagac
aaactgaagcagcttgctgatgagccccagaacagcatgcctgacgtgatcatctggatg
ctgaggggggagacgagagtggcgtacagccgtatcccagcccaccagctcctctactcc
acctacagcgaacaggcctgtggacagttctgcggcaggaccaggactatcctcatgcag
taccctatggataaaaacaaggggctgaaggttccagtccagatcagagtcaacgtgtgg
cttggcctgtctgcacacgagaagaagttcaacactttctctgaggggacgttcagtgtg
tttgctgaattgtatgagaatcaggcctacatgctgggaaagtggggaactacgggtctg
ggtttacgccacaaatactctgatgtgactggcaaactgaagctgaaacaggagtacttc
atgcccccgcgaggctgggagtgggagggagaatggttcatcgacccagagaagggtctg
ttgacagaggcagatgcgggacacactgaattcatagatgaagtcttccagaacgagact
cgcttccctggcggagagtggaaacctgctgctgagccctacgctgacgtgaatggggag
aagacccagaacccaggggagatggagtgtcctgcaggctggagctgggaggctgagtgg
gctgtggatgacaacagggctgtggatgagaaaggttgggagtatggaatcaccatccct
ccagatgaaaagcccaagtcatgggtgccagcagagaagatgtaccacgtccacagaaga
aggagagtggtcaggcccaggaagagatccgctgctggtacaaccactgagaagcgagac
caaggagacccggagggctgggagttctcctctctgattggctggaagttccacaggaag
gtgcgttccaccgacacaatccgacgccgacgctggaggaggaagatggcccccgccgac
cgcctaggggcatccgccattttcaaactggagggggcactgggggttgatacagatgag
aagagaaaagatgagacggttggtgcgtccaaaccctttggtgccaatactccaactgtt
tcctgttcatttgacaggtcgcacgtctaccacctccgcatctacatttaccaggccagg
aaccttgttgccatggacaaagacagcttctcggatccatatgcccatgtgtctttcctg
cacatgagtcaaaccaccgagaccatgaaggctactctgaaccccacgtgggaccagact
ctgatcttccataacatggagatctacggggacccccagaacatcgcccgctatcccccc
gatgtggtgctggagttctatgacaatgaccaagtagggaaacatgagctgctgggtcgg
agcacgtgtgtccccctggtgaaactgaacccaggcatggaccagacccctcaactgctg
tggtctcccatcacacacaagggcaggcgggctggggaggtgcttgtggctgctgagctc
atcctgacggataaggggattgggatggacctccctctggttcctcccaagagggcagag
aatctgtacatggtgcctcaggggatacggcctgtggtgcaactcatggccattgagatt
ctggcctggggcttgcgcaacatgaagacctaccagttggccacggtgtcctcccctagc
ctggtggtggagtgtggaggagaggtggttcagtctgctgtcatcaagaacatgaagaag
agccccaactttcctggatctgtcctcttcctcaaagtgctccttcccaaagaggagatg
tacacccctcccatcgtgctgaaggtgatcgaccacaggccatttggcaggaagccagtg
gttggacagtgtaccatagacactctggaggagtttcgctgcgacccttacatcatccag
aagtcatccatgtcatccaaagtggctctgatggccgcttctcctcgggacatcagaatt
gacatggaagacgggaggcctctgcttgaaactcggcttgcagagaaggagaaggagacc
gttgattggtggagtaaattctacgcttccattggagatcaggagaagtgccgtccttac
cttcagaaaggatatgacactttgaaggtgtatgataacgaactggaagagattcctgag
ttcaaacaactcactgatttctgcaggaccttcaaactgaaaagaggcaagaatgaagat
ggggatgacgatccatctgtcgttggagaattcaagggctcttttaaggtgtaccctcta
tcagacgacccgggtgttgctcttcctcctcgccagttccgtgagctgcctaaaagcggg
cctcaggagtgcctggtcaggatctatgtggtccgaggcatcgacctgcaacccaaggat
aacaacggccagtgtgatccttatatgaagattgccctggggaaaaagtcaattgaggac
cgagataactacttaccaaataccaccaaccctgtgtttggaagaatgtttgagatgaca
tgtttcttgcctgaagacaaagacctgaagatctctgtgtatgactatgatctgctgagt
cgggatgagaaagtgggcgagacggtgattgacctggagaaccgtttcttgtcgcgcttc
ggctcctactgtggcctgcctcagacatactgcatctctggaatcaaccaatggcgcgac
cagctgaagccctctcagatccttcagaacctggcccgcctcaaaggtgtccctccaccc
atgacagaagacaatggcaacacactgtcattcaatggggaacagtacaccctggctcaa
tttgaggctaacaacgagatccaccagcacttgggccctgccaacgaacgtctccctctg
catgtgctcagaactcaaggattggtgccagagcatgtggagaccaggacactgttcagc
agcttccagccccaactctctcagggccgtcttcaaatgtgggtggatgtttaccccaaa
agcatgggccttcctggaccaccctttgacattgcaccacgcaaggccaaaaagtatttt
cttcgagctgttgtttggaacaccactgatgtcattctggatgaaaccagcatcactggg
gagcacatgagcgatatctacgtcaaaggttggatgccaggtatggaggaggacaagcag
aagactgacgtccactacaggtctctggacggagacggcaacttcaactggaggttcatc
tttggctttgaatacctgcccgctgaacagctatgtctggtctccaagaaggaacacttc
tggagtctagacaaaacagagttcaggataccccccaagttgattgttcaaatttgggat
aatgacaagttctcattagatgattacctgggcacagtagagctggatctgtgtaaccta
actcctcctgccaagactccagagaagtgcagtctgggtatgatggaggtgatgttggat
gcagagccacacaaatcagacctgaccaactcgctgttcgctcagcagtctgtcagaggc
tggtggccctgtgtcattgaacaggatgggaaggaagtccttggtgggaaggtcgagatg
actcttgaaattgtggctgagaatgaggtggatgggaagcctgctgggaagggcagggat
gaacccaacatgaacccaaagcttgacttccctaaccgtccagacacgtccttcttctgg
ttcacaaacccctgtaagaccatgaagtttattttgtgtcgcaaattcaagtgtatgttc
attggactgatcctgctgatcctagtgctgctcttcatcggaatcctgttatactcttta
ccgaactatatttcaatgaaaattgtgaagccgtttcaatga
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integrated database retrieval system
