Oncorhynchus nerka (sockeye salmon): 115144068 Help Entry 115144068         CDS       T07952                                  Symbol msh2 Name (RefSeq) DNA mismatch repair protein Msh2   KO K08735   DNA mismatch repair protein MSH2 Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one03430   Mismatch repair Brite KEGG Orthology (KO) [BR:one00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     115144068 (msh2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:one03400]     115144068 (msh2) DNA repair and recombination proteins [BR:one03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      115144068 (msh2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_IV MutS_II MutS_I AAA_27 Motif Other DBs NCBI-GeneID:  115144068 NCBI-ProteinID:  XP_029540615 LinkDB All DBs Position LG16:complement(12526076..12548653) Genome browser AA seq 928 aa AA seqDB search MAVQPKQSLSMDAAAEHGFLTYYFSMPEKPDTTFRVFDRGDYYTVHGTEALFAAKEIFKT NGVIKTLGSGSRKLESVVLSKTNFEALVRDLLLVKQYRVEVYRNQSKSKDHSWQLEYKAS PGNLSQFEEVLFGGAEGRGAGSAGVVAVRLAVGGDGQRVVGVGYVDASLRTMGVCEFLDG ETFCNLEALLVQLSPKECLLPQGDNTDNIRQVVQRGGVLLSDRKRTEFNSKDMTQDLNRL LRTRKGEANACNVLPELDKQVAMSCLAAVVRYLELLSDQSNFSSFSLTTLDLSQYMRLDN AAVQALNLFQGSPDDTSGAHSLAGILNKCRTPQGQRLVNQWIKQPLMDKNRIEERLDLVE CLVNDGEARQTLQDDLLRRFPDLHRLSKKFHRLSATLQDCYRGYQAVGQIPALLLALEKH QGSHQMLLGAVFISPLRDLQADFIKYQEMIETTLDMNQVEHHEFLVKASFDPVLSELREK MDTLENSMQSVLNSAARELGLDAGKTVKLECNSVLGYYLRVTCKEEKSLRNNKTFTTLDV QKNGVRFTNSKLSSLNEDYTRNREEYEEAQNAIVKEIISIAAGYVDPLQSLSDVIAQLDA VVSFSVASVSAPIPYVRPRLLAADRRRLELQQARHPCLESDADTAFIPNDISFIQGEQSF YIITGPNMGGKSTFIRQVGVISLMAQIGCFVPCEKAELSMIDSCLCRVGAGDSQLKGVST FMSEMLETAAILRAATKNSLIIIDELGRGTSTFDGFGLAWAISEHIASKIGCFCLFATHF HELTALATHHLTVRNLHVTALTTQHTLTMLYRVKPGVCDQSFGIHVAELACFPPAVVAMA KQKAAELEEFQEEPSGEEGPEAKKRRSDKREGEVLIQSFLEKVKSLPAVTMTDQEVKAEL RAMKQELVAHNNAYITELLARSAPIHTT NT seq 2787 nt NT seq  +upstreamnt  +downstreamnt atggcggtgcaacctaaacagagcttgtccatggatgctgctgccgaacatggcttcctt acctactacttttccatgccggagaagccagacaccactttcagggtcttcgaccggggt gactactacacggtgcacgggaccgaagcgctgttcgccgccaaggagattttcaagacc aacggagtcatcaagaccctgggctcaggtagccgcaagctggagagtgtggttctcagc aagacaaactttgaggctctggtcagagacctgctgctggtgaaacaatacagagtggaa gtctacaggaaccaaagcaaatccaaggatcacagctggcaactggagtacaaggcgtct ccagggaatctgagccagtttgaggaggttctatttggtggggctgagggaagaggggct ggttcagcgggggttgtggccgtacggttggctgtcgggggtgacggacagcgcgtggtg ggcgtgggctatgtggacgcgtccctaaggaccatgggagtgtgtgagttccttgatgga gagactttctgtaacctggaggctctgcttgtgcagctgagccctaaggaatgtctgcta ccacagggtgacaacactgataacatacgacaggtggtgcagcgtggcggtgtgttgctg tcagacagaaagagaacagagttcaatagtaaagacatgacccaggacctcaaccgactg ctacggaccaggaaaggggaggccaacgcctgcaatgttctgcctgaactagacaaacag gtagctatgtcatgcttggcagcagtggttcgttacctggagttgctgtctgaccaatca aacttcagctccttcagcttgacgacccttgacctgagccagtacatgaggctggacaac gctgctgtacaagccctcaacctatttcagggttctcccgatgacaccagtggagcccac tcattggccgggattctgaataagtgccgcacccctcagggccagcgattggtcaaccag tggatcaaacagccactcatggacaagaacaggattgaggagagactggacctggtagag tgcctcgtgaatgacggtgaggccagacagactcttcaggatgatctgttgcggcggttc ccagatctccaccgcttgtccaaaaagtttcaccggctctcggcaacactgcaggactgt taccgtggttaccaggccgtgggccagatccctgcacttctgttggctctggagaaacac caaggaagtcaccagatgctgttgggggccgtgttcatctctcctctcagagacctgcag gctgactttatcaagtaccaggagatgatagaaactacactggatatgaaccaggtggag caccatgagttcctggtgaaggcgtcgtttgacccggtgctctctgagctgagggagaag atggacacactggagaacagcatgcagagtgtactgaacagcgcagcacgggaactgggt ctggatgctggtaagacggtgaagttggagtgtaacagtgtgttggggtattacctgagg gtgacctgtaaagaggagaagagtctgaggaacaacaaaacattcacaacactggacgtc cagaagaatggagtccggttcaccaacagtaagctgagttctttgaatgaagactacacc aggaacagagaggagtatgaggaggctcagaacgccattgttaaggagatcatcagcatc gccgcgggttacgtggaccccctgcagtcgttgagtgacgtcatcgcccagctggatgcg gtggtcagcttctctgtggcgtcagtctctgcccccatcccctacgtcaggccacgcctc ctggctgcggaccgcaggcgcctggagctccaacaggccagacacccctgcctggagtcg gacgcagacacagccttcatacctaatgatatatccttcatacagggggagcagagcttc tatatcatcacaggtcctaatatgggcgggaagtctaccttcatcaggcaggtgggcgtg atctctctgatggctcagattggctgctttgtcccctgtgagaaggcggagctaagcatg attgacagctgtctgtgccgtgtgggggcgggggatagccagctcaagggcgtgtctaca tttatgtccgagatgctggagactgcagctattctccgcgctgccacgaagaactctcta ataataatcgatgagttgggtcgcggaacatctacattcgatggctttggtctggcctgg gccatcagtgaacacatcgcctcgaagattggctgcttctgtctgtttgccactcacttc catgagcttacggcgttggccacacaccacctcaccgtccgcaacctgcacgtcaccgct ctgaccactcaacacacactcaccatgctctacagggtcaaaccaggtgtgtgtgaccag agttttgggatccatgtggcggagttggcgtgtttcccgccggcggtggttgccatggca aagcagaaggctgcagaactggaggagtttcaggaggagccgagtggggaggaggggcca gaggccaagaaacgacgcagcgataaacgggagggagaggtattgatccagtcgtttctg gagaaggtgaaatctctgccggcagtcaccatgactgaccaggaggtgaaggcggagctt agagccatgaagcaggagcttgttgcccataacaacgcttacatcactgagctcctggca cgctccgcccctatccacacaacctga

DBGET integrated database retrieval system