Oncorhynchus nerka (sockeye salmon): 115144078
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Entry
115144078 CDS
T07952
Name
(RefSeq) protein transport protein Sec24C-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115144078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115144078
Membrane trafficking [BR:
one04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115144078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
115144078
NCBI-ProteinID:
XP_029540633
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All DBs
Position
LG16:complement(12722344..12755174)
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AA seq
1199 aa
AA seq
DB search
MNMNQQTPMASPYGPPQPGYGQPSYAPLGGGYPGPYGPYNGPATAYQPGAPPQGYSPYAS
FPSKAVAANPVSDLSSPLDLGPARGPLTSAPRPVSTPQAYSQYPQGDSQNGPPPMNHSMA
QPAHRSPVSQQYSQGAMNLSGPHPSYSQQYGAPPPMQQVTNQMSGMQIGSGPPTSVGPGY
AHHPSSQPPISAAYSSAAPPSYTQAPPPLSAAPSQPPPPSEPVASPPYYGGPPPPQQQPF
PSAHHPSQPFVSSSPYLGPPSQPQAPPVSQQQSFPPGPPAQQPFPNSAPPPVSQASYSGP
PPLTQHSFPPSSQSGPFPPISISPSQYPGPQPQSQPGPPPFHSGPSPRGPIPPPSMSQQQ
ANHLPPGPMQQQQPPQPGMQGGYPTQQNGAFGQPRGPQPGYAGPQYSGQQNYGAGPAPAP
VPPAQKRLDPDSIPSPIQVIEDDRVNKSSEPFTTGVKGQAPPLVTTNFQVKDQGNASPRF
IRCTAYNMPCTADMAKQSQVPLAAVIKPLAMLPPDETPPYIVDHGDGGPIRCNRCKAYMC
PYMQFIEGGRRFQCGFCSCVTEVPPHYFQHLDHTGKRVDCYDRPELSQGSYEFVATVDYC
KNNKLPQPPSFIFFIDVSYNAVKSGMVNIVCQELKTLLDYLPRENPEADSVVRVGFVTYN
KVLHFYNVKSSLAQPQMMVVSDVSDMFLPLLDGFLVGVNDSRMVIESLLDQIPEMFADTR
ETETVFGPVIQAGLEALKAADCAGKLFVFHSTLPIAEAPGKLKNREDKKLVGTDKEKSLF
QPQSGFYSNLAKECVAQGCCVDLFLFPNQYVDVATLGVVPVSTGGSVYKYTYFQAETDRE
RFLNDLRRDVQKPMGFDAVMRVRTSTGIRATDFFGSFFMSNTTDVELAGLDCDKTVTVEF
RHDDKLSEDTGALMQCAVLYTSCSGQRRLRVHNMAVNCCSQLADLYRNCETDTIINFFSK
YAYRSILNTPTKTVRDTMVNQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLK
SDVLQPGADISLDDRAYLRQLLGCMDVSESHIFFYPRLLPLVKLDGGSLPMAVRNSEERL
SKGGVYLLETGLHLFLWVGANAQQELLSNIFGTPTFSQIDPNMTSLPELDNPFSQRLREI
IDSFRSQRSRYMKLMVVKQEDKAELIFKHFLCEDKSTSGGASYVDFLCHMHKEIRQLLS
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgaaccagcagactcccatggcgtctccgtacggcccgccccagcctggctat
ggccagcccagctacgctcccctgggagggggctaccctggcccctacggaccctacaac
gggcccgctacagcctaccagcctggggctccaccacaaggttactctccctatgccagt
tttccctctaaggctgtggcagctaaccctgtctctgacctgtcctctcctcttgactta
ggacctgccagaggcccccttacctctgccccccgtccagtctccaccccccaggcgtac
tcccagtatccccagggagactctcagaacggacccccacctatgaatcactctatggcc
cagccagctcacaggtcgccagtgtctcagcagtatagccaaggtgctatgaacttgtca
gggccacacccctcctactcccagcagtacggtgctccgccccccatgcaacaggttacc
aatcagatgtcagggatgcagattgggtctggtccccccacctctgttgggccgggatat
gctcaccatcccagctcccagcctccaatcagtgctgcatactcctctgcagccccaccc
tcctatacgcaagctcctcccccattgtctgctgccccctcccagcctccccctcccagt
gaacctgtagcctccccgccttactatggtggcccccctcccccccaacaacaacccttc
ccctctgcccaccatccctcccaacccttcgtctcctcctctccatacttgggccctccc
agccaacctcaggcccctccagtctcccaacagcagtccttcccacctggcccccctgct
cagcaacccttccccaactccgcccctcctccagtctcccaggcctcctactctggtccc
cctcctctcacccagcactctttccctccctcctcccaatctggccccttcccacctatc
tctatatccccttcccagtacccaggtccacagccccagtcccaacccggaccccctccc
ttccactctgggccctctcctcgaggccccattccacccccctccatgtcccagcagcag
gccaatcaccttccccccggccccatgcaacaacagcagccgcctcagcctggcatgcag
ggaggatacccgacccagcagaatggtgcgtttgggcagcctagagggccccagcccggc
tatgcaggcccgcaatattccgggcaacagaactacggagcaggccctgcccctgcaccc
gttccccctgcacagaagagactggaccctgattccatccccagcccgattcaggtgatt
gaggatgaccgggtcaacaagagcagtgagccgttcaccactggggtcaaaggtcaggct
ccacccctggtcaccaccaacttccaggtgaaagaccagggcaatgccagcccgcggttc
atccgctgtacagcctacaacatgccctgcaccgccgacatggccaaacagtcccaggtc
cccttggccgctgtaatcaaacccctggctatgctgccacccgacgagacccctccgtac
attgtggaccatggggacggcggccctatccgctgtaaccgctgtaaggcctacatgtgt
ccctacatgcagttcatcgagggcggacgccgcttccagtgtggcttctgcagctgcgtc
acagaggttcctccccactacttccagcatctggaccacaccgggaagagggtggactgc
tacgatcggccagagctctctcagggcagctacgagtttgtggccaccgtcgactactgt
aagaacaataagctcccccagcccccgtcgttcatcttcttcatcgatgtgtcttacaac
gccgtgaagagcggcatggttaacatcgtctgtcaggagctcaagactctactggactac
ctgcccagggagaatccagaggcagactcggtggtgcgtgtgggttttgtgacctacaac
aaggtgttgcacttctacaacgtcaagtccagcctggcccagccccagatgatggtggtc
agtgacgtcagtgacatgttcctccctctgctcgacggcttcctggtcggcgtcaacgac
agccggatggtcatcgagagtttgctagaccagattccggagatgtttgcagacaccagg
gagactgagacggtgtttggaccagtcattcaggcaggactggaggcactgaaggctgca
gactgtgccgggaagctgtttgtgttccactccactctgcccatcgctgaggctcctggg
aaactgaagaatagagaggacaagaaactagtgggaacagacaaggagaagtctctgttc
cagccccagtctggtttctatagtaacctcgctaaggagtgtgtagcacagggctgctgt
gtagacctcttcctgtttcccaaccagtacgtcgacgtggcaacgcttggcgtggtgccc
gtctccaccgggggttccgtctacaaatacacctacttccaggccgagacggaccgtgag
cggttcctgaatgatctgcggcgagacgttcagaagccgatgggcttcgatgctgtcatg
agggtccgaaccagcacaggtatcagagcgacagatttcttcggttcgttcttcatgagc
aacacgacagacgtggagctggcaggcctggactgtgacaagactgtcaccgtggaattc
cgccacgacgacaagctcagcgaggacaccggcgcgctcatgcagtgtgcggtgttgtac
accagctgtagtggtcagcggcgtctgcgggtccacaacatggcggtcaactgctgctcc
cagctcgccgacctctaccggaactgtgagacggacacaatcatcaacttcttctccaag
tacgcgtaccgtagcatattgaacacccccaccaagacagtgagagacaccatggtgaac
cagtgtgcccagattctggcctgctaccgcaagaactgtgccagcccctcgtctgccgga
cagctgatcctaccagagtgtatgaagctgctgccggtctatctgaactgtgtgttgaag
agtgacgtgctgcagccgggagctgacatctcattggacgacagagcctacctgagacag
ctgctcggctgtatggatgtatcagagagccacatcttcttctatccccgcctactgccc
ctggtgaagttggatggagggtcgttgccaatggcagtgcgtaactcagaggagcgcctg
tcgaagggtggagtctacctcctggagacagggctccacctcttcctgtgggtgggagcc
aatgctcagcaggagctgcttagcaacatctttggaacgcccaccttcagccagatagac
cccaacatgacgagtctgccggagctggacaacccgttctcccagagactccgagagatc
atcgactccttcaggtcacaacggtcacgatacatgaagttgatggtggtgaagcaggag
gacaaggcggagctaatctttaagcacttcctgtgtgaggacaagagcaccagcggagga
gcttcctatgtcgacttcctgtgtcacatgcacaaggagatccgccagctactcagctag
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integrated database retrieval system
