Oncorhynchus nerka (sockeye salmon): 115144095
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Entry
115144095 CDS
T07952
Name
(RefSeq) protein quaking-A-like isoform X1
KO
K14945
protein quaking
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115144095
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115144095
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GFIT
Motif
Pfam:
STAR_dimer
KH-I_KHDC4-BBP
Quaking_NLS
KH_1
KH_KRR1_2nd
Motif
Other DBs
NCBI-GeneID:
115144095
NCBI-ProteinID:
XP_029540667
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All DBs
Position
LG16:complement(13123515..13139577)
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AA seq
347 aa
AA seq
DB search
MVGEMSEQVRERPRPSPDYLMQLMTDRKVMSSLPNFTGIFTHLERLLEEEIGRVRKDMYN
DSMNGGVAAEGRNSEELPNGIGPVAQLQEKLYVPVKEYPDFNFVGRILGPRGLTAKQLEA
ETGCKIMVRGKGSMRDKKKEELNRGKPNWEHLSEELHVLITVEDTHNRAQIKLQRATVEV
KKLLVPAAEGEDSLKKMQLMELAILNGTYRDANIKQPTMAFSLASSQQPRLISSPSPVMQ
QAMRNPAPVQQPNLMPHLIRQIQSQQALMQGANQHAGLMQQSPESGGFFYAPYEYSPYTL
TPSILEYPMDTSGVLGAMTAKVQRHNMRVHPYQRVVNTDRAATATNP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggtcggggagatgagtgagcaggtccgggaaagaccaaggcccagcccggactacctg
atgcagttgatgacggaccggaaggtgatgagctctctgcccaacttcactggcatcttc
acacacctggagcggctcctagaagaagagatagggagagtgcgcaaggacatgtataac
gactcgatgaatggaggtgtggccgccgaggggcggaactctgaggagctgcctaatggg
attggtccagtggctcagctgcaggagaagctctacgtgcccgtcaaagagtaccccgac
tttaactttgtaggtaggatcctgggtccgaggggtctgacagccaaacagctggaagca
gagaccggctgtaagatcatggtacgagggaaaggatccatgagagacaaaaagaaggag
gagctgaacagagggaaacctaactgggaacacctgagtgaggaactccatgtactcatc
acagtggaagacacacacaacagagctcagatcaaactacaaagagccaccgtagaggtc
aagaaactactcgtaccagccgctgaaggagaggacagtctaaagaagatgcagttgatg
gagctggccattctcaatgggacctacagagacgccaacatcaagcaacccactatggct
ttctccctagcctcctctcagcagcctcggctcatctccagtccctcccctgttatgcag
caggctatgagaaaccccgcccctgttcagcagcccaatctcatgcctcacctgattcgt
cagatccagagtcagcaggccctcatgcaaggagccaatcagcatgcaggactgatgcag
caatcacctgaatcaggaggattcttctacgctccctacgaatattccccctacacccta
accccatctatactagaataccccatggacactagtggagtattaggagcgatgacggct
aaggtgcaacgccacaatatgagggtccatccttaccaaagagtagtgaacaccgacaga
gctgccacagcgactaacccttga
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