Oncorhynchus nerka (sockeye salmon): 115144109
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Entry
115144109 CDS
T07952
Symbol
cacna1g
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1G
KO
K04854
voltage-dependent calcium channel T type alpha-1G
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115144109 (cacna1g)
04020 Calcium signaling pathway
115144109 (cacna1g)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115144109 (cacna1g)
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115144109 (cacna1g)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF4834
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
115144109
NCBI-ProteinID:
XP_029540703
LinkDB
All DBs
Position
LG16:14955821..15159226
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AA seq
2340 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDHDCESERCKILEDFDDFIFAFFAVEMVIKMVALGIFGKKCY
LGDTWNRLDFFIVLAGMLEYSLNLQNVSFSAVRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLPENFSLPLSVELGNYYHTENDDEN
PFICSMPRENGMRLCSSVPTLYEEGGLQCQMDMKSYNSTDNTTCINWNQYYSNCSAGHVN
PFKGAINFDNICYAWIAIFQVITLEGWVDIMYFVMDSHSFYNFIYFILLIIIGSFFMINL
CLVVIATQFSETKQRESQLMKEQRIRFLSNASTLASFSEPGSCYDELLKLLVHVIRKGCR
QVAHVCRALMRRAGMNIAASPPALERERGSQRRRRKASRQGSVVSRKGSMSVHHLAHQHH
HHHHHYHLVNGSVRGGLGGRGVEGNNGGAGRLMLGPPPSTSDLNLATPASPANPALGIMC
HTDCHLEPTTPTTLTPTPSPFSLAPTPMSRAMKRNSVPFAAPGPKNYPTLQPRALMESRS
VSVTASTISNINLNLNIPPLTLERGPQSLVDTHTPMPAQLSNRDLSVIGTLDPAFPFDPE
SCPYCAKALAGESEGTDGNENPGDSDSEGIYEFTQDLHHRDRRDRRDSRQPRKGQRKLGT
TAGRVVRAWRLVCDTFRKIVDSKYFGRGIMIAILINTLSMGIEYHEQPDELTNALEISNI
VFTSLFALEMLLKVLVYGPFGYIKNPYNIFDGIIVVISVWEIVGQQGGGLSVLRTFRLMR
VLKLVRFMPALQRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFGSERDGDTL
PDRKNFDSLLWAIVTVFQILTQEDWNKVLYNGMASTTPVAALYFIALMTFGNYVLFNLLV
AILVEGFQTEGEESKSVSEADLSSRSMEDVNGSRKDVSGSPVPINGHVDLKTSLTPPLIT
HTAATPMPVPKLPSVGDPALGYESRRGSNVSMDLASYDKSPTSARSTSPYAPWCSASGWT
SRRSSWNSLGRAPSLKRTKLQSGERRSLLSGEGGSSSEDEEGGGGGTSEGDDASLCHINS
MSQPRHRRMESVETRGSIDLAPDTLLQVPYLYRSASMHSSRPPSLGGLRAPEHSDCNGKG
TSAPGGALAPTQLSLEDNTEDDAAEEEVVVGHFARLSGWLDRKQPEWCRQRDTWSLYILP
PDSRFRMACNKIITHKMFDHIVLVIIFLNCITIAMERPRIDPYSVERIFLTLSNYIFTAI
FVAEMTVKVAALGWLFGDKAYLRSSWNILDGILVMISAIDILVSLVSNSSPKILGMLRVL
RLLRTLRPLRVISRAPGLKLVVETLMSSLKPIGNIVVICCAFFIIFGILGVQLFKGKFFA
CQGDDVRNITNKSDCIMANYKWVRQQYNFDNLAQALMSLFVLASKDGWVDIMYDGLDAVG
VNQQPQLNYNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRRSQEAEEAKRREEKRL
KRMEKKRRSKEKELAEAQSKPYYSDYSPTRLLIHKMCTSQYLDLFITIVIALNVITMAME
HYQQPKELDEALKICNYIFTIVFVLESVFKLVAFGFRRFFKDRWNQLDLAIVLLSIMGIT
LEEIEVNASLPINPTIIRIMRVLRIARVLKLLKMAVGMRALLDTVMQALPQVGNLGLLFM
LLFFIFAALGVELFGDLICDELHPCEGLGRYATFKNFGMAFLLLFRVSTGDNWNGIMKDT
LRDCQQENAGTCYNTVVSPIYFVSFVLTAQFALVNVVIAVLMKHLEESNKEAKEEAELEA
ELELELQHGGRGGCGSGRSPQLSPLALGMEEGSGGSPWRSPEREIQRGNVMDSPPADITR
RDSIHISTDAPLGLEPPLEVELLDPGEPLEDNLLSVRKSAVSRTHSLPNDSYMFLPLEPF
GPPGAGLAPGLSPVLTQATGPQHIEALSSALSGSSTSVRSQPEESSQQSAVPTDFFRPIS
PHSLSDSENIPRLPPPQHTHTLSRTLRRQVAVSNDSQEALWSDGGECEEGVLNVASLALP
LSSSSSSSSHLHQQPSLWLVPATPGASPQLSRPSSVHTQHPFSNHDQHHLSSSPNSPSSL
SSPPPPLPSTRPWRQEEASADHEVSLINRVGLAGSEDVTGVGLGSEVGGLNGSYQGHEVG
CGEGSRPCLRQLKRFHSADAQGRSILASRPRPLSWLDDPRRHSVEVCSSVESSPQCSTMS
SGFVSRADSLQIHSQTTTKTLPSPRRKKKMSPPCISVDPPDGLESQPGLHPTLGGLGGLG
MPPPLPSRDTSCLRRRAPSSDSKDSFDLGAGEGLGQEGGGPNPKLLTLPSFSFEKTSSEH
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcttgttgaactgcgtcaccctggggatgttccaaccctgtgaggaccac
gactgtgagtcggaacgatgcaagatcctggaggactttgatgactttatctttgcgttc
tttgcggtggagatggtcatcaagatggtggcactgggcatctttgggaagaagtgttat
ctaggagacacctggaacaggctcgacttctttatcgtactggccggaatgctagagtac
tctctgaacctgcagaacgtgagtttctcagcggtgagaacggttcgagttctgagaccc
ctccgagccatcaacagagtacctagtatgcgtatcctggtgaccctgctactggacacc
ctgcccatgctggggaatgtcctgctgctctgtttctttgtcttcttcatcttcggcatt
gtgggcgtgcagctgtgggcggggctactgaggaaccgctgcttcctgcctgagaacttc
tcacttcctctgtccgtcgagctcggcaactattaccacacggagaacgatgacgagaac
cccttcatctgctccatgcccagggagaacggcatgcgcctgtgttcctctgtgcccacc
ctgtatgaggagggaggtctccagtgtcagatggacatgaagtcctacaacagcacagac
aacaccacctgtatcaactggaaccagtactacagtaactgctcggcgggacacgtcaac
cccttcaaaggggccatcaactttgataacatctgctacgcctggatcgccatctttcag
gtgatcacgctggagggctgggtggacatcatgtactttgtgatggattctcactccttc
tacaacttcatctacttcatcctcctcatcatcattggctctttcttcatgatcaacctg
tgtctggtcgtcatcgccacccagttcagtgagaccaagcagagggagagccagctgatg
aaggaacagcgcatccgtttcctgtccaacgctagtaccctggcctccttctccgagccg
ggctcctgctacgacgagctgctcaaactcttggtccatgtcatccgcaaggggtgcagg
caggtggcccatgtctgtcgggccttgatgcgccgtgctgggatgaacattgcagcctct
ccccctgccctggagcgagagagggggagccagagaaggaggaggaaggcttccagacag
ggttctgtggtctccagaaaagggtcgatgtccgttcatcacttggctcaccaacatcac
catcatcatcatcactatcacctagtgaatgggagtgtgagggggggactagggggtagg
ggggtggagggcaacaacggtggcgctggacggctcatgttgggtcctcctccttcgacc
tctgacctgaacttggcgaccccggcgtcaccagccaatcccgcgctgggcatcatgtgc
cacacagactgccacctggagcccaccacccccactaccctcacccctacccctagcccc
ttctccctggcacccacccccatgtccagggctatgaagaggaactcagtgccctttgct
gcccccggtcctaagaactaccccaccctacagcccagggcactaatggagtctagaagt
gtcagtgttacagctagtaccatcagtaatataaacctcaacctcaatataccaccacta
accttggagaggggacctcagagtctggtggacacacacacacccatgccagcccagcta
tccaaccgtgacctgagtgtcatcggaaccctggaccccgcgttcccctttgacccagag
tcatgcccatactgtgccaaggccctagcaggggagtcagagggcacggacggaaacgag
aaccccggggactcagacagcgagggcatctacgagttcacccaggacctccaccacaga
gaccgcagggaccgtcgggacagccgtcagcccaggaaggggcagcgaaagctgggtacc
acggcagggcgagtggtccgggcctggaggctggtgtgtgacacctttaggaagatagtc
gacagcaagtactttggaagagggatcatgatcgccattctgattaatacactgagtatg
gggattgaataccacgaacagcctgatgagctgaccaatgcgttggagatcagtaacata
gtgttcaccagtctgtttgccttggagatgttactcaaggtgttggtctatgggccattc
ggatacatcaaaaacccctacaacatttttgacggaatcatagtggtcatcagtgtatgg
gagatcgtgggccagcagggcggtggtctgtctgtgctgcgtaccttcagactgatgcgc
gtgttgaagctggtgcgcttcatgcccgctctgcagaggcagctggtggtgctgatgaag
accatggacaacgtggccaccttctgtatgctactcatgctcttcattttcatcttcagt
atcctgggcatgcatctgtttggctgtaagtttggatcagagagagatggagacactcta
ccagacaggaagaactttgactctctgctctgggccatcgtcactgtgtttcagatccta
actcaagaggactggaacaaggtgctgtataatggtatggcttccaccactcctgtggct
gctctctacttcatcgccctcatgacctttgggaactacgtcctcttcaacctgctggtg
gccatcttggtggaaggcttccagactgagggagaagaatccaagtcagtgtcggaggca
gatttatcctcgaggagtatggaggacgtgaacggcagtagaaaggatgtgtctggctcc
ccggtcccaataaacggtcatgttgacctgaagaccagtctgacccctcctctgattacc
catactgctgccacccccatgcccgttcccaagctgccctccgtgggtgaccctgccctg
ggctacgaatctcgacgcggcagcaatgtctccatggacctagcctcttacgacaagtct
ccgaccagtgcccgtagcacctccccttacgccccgtggtgctctgccagtggctggacc
agccgtcgatcgagctggaacagcttaggccgcgccccctcgctcaaacgaacaaagctt
cagtctggcgaacggcggtcgctcctctccggcgagggagggtccagttcggaggatgag
gagggtggaggaggggggacatcggagggggacgatgcatccctgtgtcatattaattcc
atgtcccagcccagacacaggaggatggagtcggtggagaccagggggtccatagacctg
gcccccgacacactgctacaggtgccctacctgtatcgctcagccagtatgcacagctcc
agacccccctcgctaggaggcctgagagccccagaacacagtgactgtaatgggaagggt
acttcggcccctggcggggccctggcccctacacagctctccctggaggacaacacagag
gacgacgcagcagaggaggaggtggtcgtgggtcattttgccaggctgtcaggctggctg
gacaggaaacagccagagtggtgtcgacagagagatacctggtccctgtacatattaccc
ccagactccaggtttcggatggcgtgcaataagatcataacccacaagatgtttgaccac
attgttctggtcatcatcttcctcaactgcatcaccatcgccatggagaggccgaggata
gacccatacagcgtggagcgaatcttcctcacgttatccaactacatcttcacagcgatc
ttcgtggctgagatgacagtaaaggtggctgcactgggatggttatttggtgataaggcc
tacctgaggagcagctggaacattctagatgggattttagtgatgatttcagccatagat
atcctggtctcattggtatcgaacagcagccccaagatactgggcatgctcagagtgctg
cgcttgctacggacgctcaggccactacgtgttatcagcagggcgccaggtctgaagctg
gtagtggagactctgatgtcatctctgaagcctatagggaacatcgtggtcatctgctgc
gctttcttcataatctttggtatcctgggagtacagctcttcaaggggaagttctttgca
tgtcagggagatgacgtgagaaacatcaccaacaagtcagactgtataatggccaactac
aaatgggttagacagcagtacaactttgataacctggcacaggctctgatgtctctcttc
gtgctggcttctaaggatggttgggtggatatcatgtatgatggattagatgcagtggga
gtcaaccaacagccacagctgaactacaacccgtggatgctcctctacttcatctccttc
ctgctcatcgtcagcttcttcgtgctcaacatgttcgtgggcgtggtggtggagaacttc
cacaagtgtcgtcgcagccaggaggccgaggaggctaagcgcagggaggagaagagactg
aaacggatggagaaaaagagacggagtaaggagaaggagctggctgaagctcagagtaag
ccttactactcggattactcccccactcgtctcctcatccacaagatgtgcacctcccag
tatctggacctcttcattaccattgtcatcgcactcaatgtcatcaccatggcgatggaa
cactaccagcagccaaaggagttggacgaggcgttgaagatctgtaactacatcttcacc
atcgtcttcgtcctggagtctgtcttcaagctggtggcctttggcttccggcgtttcttc
aaggacaggtggaaccagctggacctggccatagtgttgttgtccatcatgggcatcact
ctggaggagattgaggtcaacgcatccctgcccatcaaccctactatcatcagaatcatg
agagtgctaaggatagcacgagtgctgaagctactgaagatggcagtggggatgagagcg
ttgctggacactgtcatgcaggctctgcctcaggtggggaatctgggtcttctcttcatg
ctgctcttctttatcttcgcagcactgggagtggaactgtttggtgatctcatttgtgat
gagctgcacccgtgtgagggcttgggacgctacgctacatttaagaactttggcatggcc
ttcctgttgctgttcagagtatccacaggagacaactggaacggcattatgaaggacacc
ctgcgagactgtcaacaggagaatgcaggcacctgttacaacacggtggtctcccccatc
tacttcgtctcctttgtgttgacagcccagtttgccttggtcaacgtggtcatagccgtc
ctcatgaagcacctggaggagagcaacaaagaggccaaggaggaggcagagctggaggct
gaactagagctggagctccagcatggaggaaggggagggtgtggcagtgggagatcaccc
cagctaagccctctggccctgggcatggaggagggatctggcggctccccctggaggtct
ccagagagggagatccagaggggcaatgtgatggattctcccccagcagatatcactaga
agagactccatacacatcagcactgatgctccgctaggcctggagccaccactagaggtg
gagttacttgatcctggggagccgctggaggacaacctgttgagtgtacggaagtcagcg
gtgagccgcacccactctctacccaatgacagctacatgttcctgcctctggagcccttc
ggacccccaggagccggcctggctcctggcttatctccagtactgacacaggctacaggg
ccgcagcacatagaggcacttagcagcgccctgtcaggctccagtacctcggtgcggtcc
caaccagaggagagctcccagcagtcggctgtgcctacagacttcttcagacccatcagt
cctcacagcctctcagactcagagaatatacccagactacccccgccacagcacacacac
acacttagccgcacactccgcagacaggtggcagtatctaatgattcccaggaggctctg
tggtctgacggaggggagtgtgaggagggggtcctaaatgtagcttccctagccctcccc
ctttcctcctcctcttcctcatcctcccatcttcaccagcagccttctctctggctggtc
cctgccaccccaggggcgtcccctcaactgtcgcgccccagtagtgttcacacccaacac
cccttctcaaaccatgaccagcaccacctctcctcctcacccaactccccctcctccctc
tcctcaccccctcctcccctcccctccactcgcccctggagacaggaagaggcctcggca
gaccacgaggtgtcgctcatcaaccgggtggggctggcggggagtgaggatgtcaccggt
gtcggactggggtcagaggtcggaggtctcaatggcagttaccaaggtcatgaggttggc
tgtggtgaggggagccggccgtgcctgagacagctgaagaggttccacagcgctgacgcc
cagggtcggagcattctagcgtcccggccacgccccctgtcctggttggacgatcctcgg
cgccactcagtggaggtgtgttcgtctgtagagtccagtccccagtgcagcaccatgtcc
tcggggttcgtctcccgagcagacagcctccagatccattcccagaccacaacaaagacc
ctgccctctccccgacgcaagaagaaaatgagccccccgtgtatctccgtagacccccct
gatggactggagtcccagcccggcctccaccctaccctgggaggtttagggggcctaggg
atgccccctcccttacccagccgggatacctcctgtctgaggagacgggctccctccagt
gactccaaggactcctttgacctcggggcaggggaggggctgggccaggagggagggggg
cccaaccccaagctgttgactctgcccagcttctccttcgagaagacaagctctgagcac
tga
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