Oncorhynchus nerka (sockeye salmon): 115144118
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Entry
115144118 CDS
T07952
Name
(RefSeq) tripartite motif-containing protein 65-like isoform X1
KO
K12031
tripartite motif-containing protein 65
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115144118
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115144118
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
PRY
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_3
zf-B_box
Prok-RING_4
zf-RING_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
115144118
NCBI-ProteinID:
XP_029540722
LinkDB
All DBs
Position
LG16:15577349..15601234
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AA seq
515 aa
AA seq
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METHNLSCAICLDRFKVPVTIPCGHTFCRDCITIHWDTKSKSDIGPHCPICNEKFPTRPI
LKRNVSLSVLAEATANSAGAFGRDTVPVMRGDMARATPLILCDRHKKPLVYYCRKDNMCV
CCECAISECKNHEKVLVEAEKENRELLLRRKSVEVGICMEKTERSIAELTENITKAKVTL
QQTSHWVNAKFSMLLNVLAEKQESTENFIEQEKEASLSQGEARLEELQERAKQLGERQSQ
IATLRNLPDIQLIQESRLVEVPRMKDIPVDVTPNLQERLSGVTDVLSRISKLVSEDLEKA
VSTAVGQDKQGSPQDKRPVLAVVPSPAAPCHPAGKEGLSEYRCTLTFDPRTANSHLLLCQ
ENLRAEHLTSGPRPVPAHEARFDHTWQVLCFQGFKHGKHYWELELSKPWAYLGVTYEGIP
RKEKGKRCMVGMNDLSWSLQLDERQLSAWHNGRRETVAGHSHHSRIGILLDYEAGTLTYY
GDGHTRLHAFHCAFTQELFPACWIGEGVSITLCSP
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggagacccataatttgtcctgtgccatttgcttggaccgcttcaaagtcccagtcacc
atcccatgtggtcacaccttctgtcgagactgcatcacgattcactgggacaccaagtcc
aagtccgacatcgggccgcattgccctatctgcaatgagaaattccccactagacccatc
ctgaaacgcaacgtgtccctgtccgtcctggctgaggccacagcgaacagtgccggtgca
ttcggtagagacactgtaccggttatgaggggcgacatggccagagccacgcccctgatt
ctgtgtgaccgacacaagaagcccctggtgtactactgccggaaggacaacatgtgtgtg
tgctgcgagtgtgccatctccgagtgtaagaaccacgagaaagtgctggtggaggctgag
aaggagaaccgagagttactactgaggaggaagagtgtggaggtgggaatatgtatggag
aagactgagaggagcatcgctgagctgacagagaacatcaccaaagccaaggtgaccctg
cagcagacctcccactgggtgaatgccaagttctccatgctgttgaacgtgctagcagag
aaacaggagtctacagagaacttcattgagcaggagaaggaggcttccctctcccagggg
gaggctaggttggaggagctacaggagagggccaagcaactcggggagcgccagagccag
atcgcaactcttcgcaacctgcccgacatccagctaatacaggagtctcggctggtggag
gtccctcgcatgaaggacattccagtggatgtgacccctaacctgcaggagaggctcagc
ggggtgacagacgtcctctcacggatctccaagctagtgtctgaggacctggagaaggct
gtgtctacagctgtggggcaggacaagcaaggttctccccaggataagcgccctgtcctg
gctgtggtccccagtcctgctgctccatgccaccccgctgggaaggagggcctcagtgaa
taccgctgcaccctgacctttgaccctcgcacagccaacagtcacctgctcctctgccag
gagaacctacgggcggaacacctgacctctgggccgcgccctgtcccagcccacgaagct
cgctttgaccacacctggcaggtgctctgcttccagggcttcaaacacggaaagcactac
tgggagctggagttgtccaagccatgggcctacctgggggtgacttacgagggcatcccc
aggaaggaaaaggggaaaaggtgcatggtgggaatgaacgatctgtcctggagcctccag
ctggatgagcgccagctgagtgcctggcacaacggccgccgggagacggtggctggccac
tcccaccactcccgcatcggaattctgctggactacgaggctggaacactgacgtactat
ggagacgggcatacgcggctgcatgccttccactgtgccttcactcaggagctgttcccc
gcctgttggataggggagggcgtgagcatcaccctctgctcgccatga
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