KEGG   Oncorhynchus nerka (sockeye salmon): 115144209
Entry
115144209         CDS       T07952                                 
Symbol
mlst8
Name
(RefSeq) target of rapamycin complex subunit LST8
  KO
K08266  target of rapamycin complex subunit LST8
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04136  Autophagy - other
one04140  Autophagy - animal
one04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    115144209 (mlst8)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    115144209 (mlst8)
   04136 Autophagy - other
    115144209 (mlst8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115144209 (mlst8)
Membrane trafficking [BR:one04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    115144209 (mlst8)
   mTORC2 complex
    115144209 (mlst8)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_IFT140_2nd Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_NWD2_C TAF1C_beta-prop Beta-prop_IFT122_2nd Hira Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 DUF5854 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 115144209
NCBI-ProteinID: XP_029540924
LinkDB
Position
LG16:complement(19125029..19133069)
AA seq 328 aa
MNVNQGQGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIA
AAGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRN
LQCQRIFQVNAPINCVCLHPNQAELIVGDQSGVIHIWDLKTDHNEQLIPEPEVSINSVHI
DPDASYMAAVNSSGNCYVWNLAGGMGDEVTQLIPKTKIPAHKRYSLRCKFSPDSTLLATC
SADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWC
VETGEIKREYSGHQKAVVCLAFNDSVLG
NT seq 987 nt   +upstreamnt  +downstreamnt
atgaacgtgaaccagggtcagggaacagtggggagtgacccggtgattctggccactgct
ggatatgaccacacagtgcggttctggcaggcccacagcggcatatgcaccaggacagtc
cagcaccaggactctcaagtgaactccctcgaagttactcccgacagaagtatgattgct
gctgcaggttatcaacacattcgtatgtatgatctaaattccaacaacccaaacccggtc
ataaactatgatggagtcagtaagaacattacgtcagtgggcttccatgaggacggccgc
tggatgtacacaggaggagaggactgcatggctcgcatctgggacctgaggtcaaggaac
ctgcaatgtcagaggatctttcaggtcaatgctcccatcaactgtgtatgcctccatccc
aaccaggctgaattgatcgtgggggaccagagcggtgtgatccatatctgggatctgaag
accgatcacaacgagcagcttattcctgaaccagaagtgtccatcaactcagtccacatt
gacccagacgccagctacatggcagcagtcaatagctcgggaaactgttacgtttggaac
ctggcaggagggatgggtgacgaggtgacacagctcatccccaaaaccaagatccccgct
cataagcgctactccctccgctgcaaatttagtcctgattccactctgctggcgacctgc
tcggcggaccagacgtgtaagatctggagaacatctaacttctctctgatgacggagctg
agcatcaagagtaataaccctggagagacatcccgaggttggatgtgggactgtgctttc
tctggagactcacagtacattgtaacagcctcctctgacaacctggcacggctgtggtgt
gtggagactggtgagatcaagagggagtacagcggccatcagaaagctgtggtgtgtctg
gcctttaacgacagcgtgctgggctga

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