Oncorhynchus nerka (sockeye salmon): 115144231
Help
Entry
115144231 CDS
T07952
Symbol
ccz1
Name
(RefSeq) vacuolar fusion protein CCZ1 homolog isoform X1
KO
K27045
vacuolar fusion protein CCZ1, animal type
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115144231 (ccz1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115144231 (ccz1)
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
Others
115144231 (ccz1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Intu_longin_1
Intu_longin_3
Intu_longin_2
TSLP
Motif
Other DBs
NCBI-GeneID:
115144231
NCBI-ProteinID:
XP_029540962
LinkDB
All DBs
Position
LG16:19708006..19723093
Genome browser
AA seq
480 aa
AA seq
DB search
MLMISPRMASGMQEKQYTPSLLSFFVYNPSFGSREGEEEKKILFYHPSEVEKNEKIRNVG
LCEAIVQFTRTFCPTKPAKSLHTQKNRQFFFEAEDSFWIVMVVRNPMVEKPNKDGRPPTI
EYQEEEILDTVYGAVLRECYSMYKLFNGTFGRAMEAGGVELLMQKLDKFFYRYLQTLHLQ
SCDLLDVFGGIAFFPLDKMTYLKIQSFVNRVEESLSLIKYTAFLYNDQLIWSGLEQDDMR
ILYKYLTTSLFPRHSEPELAGRDSPLRPEVAGNLLHYGRFLTGPANLKDPEAKFRFPRIF
VNTEDSYEELHLIVYKAMSAAVCFMISASVELTREFCEQLDGLVGPQLTLLASDICEQYN
VNRRISGPDKEPQFKFIYFNHMNLAEKSTIHMRKTASVSLTSVHPDLMKILGDINCDFAR
VDEDEEIIVKAMTDYWVVGKKSDQRELYVILNQKNANLIEVNEEVKRLCATQFNNIFFLD
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgctgatgatcagtccgagaatggcttcgggaatgcaagagaaacagtacaccccatca
cttctcagctttttcgtctataatccttcatttgggtcacgagagggagaggaggagaag
aagattttattctaccatcccagtgaggtcgagaagaatgagaagatccgtaatgtcggt
ctttgtgaggccattgtacagtttaccagaaccttctgtccaacaaagcctgctaaatcc
ctacacacacagaagaacaggcagttcttctttgaagcagaggacagtttctggatcgtt
atggtggtgcggaacccgatggtagaaaaacctaataaagatgggagacctcccacaata
gaatatcaggaagaggaaatacttgacacagtttacggtgcagtattacgggaatgctac
agtatgtacaagctcttcaacggcacatttggcagagcaatggaagcaggcggggtggag
ctgctcatgcagaagcttgacaagttcttttacaggtacctgcagacgctgcacctgcag
tcctgtgacctgctggacgtgttcggtgggattgcctttttccccctggacaagatgacc
tacctgaagatccagtcattcgtaaacagagtggaggagagcctcagcctgatcaaatac
acagccttcctctacaacgaccagctgatatggagtggtctggagcaggatgatatgcgg
atcctgtacaagtacctgacgacgtcactgttccccagacactctgaaccagagctggct
ggtagggactctcccttaaggccagaggtggcagggaatctgcttcactatgggaggttt
ttgacaggacctgctaacctcaaagacccagaggccaaattccggttccctagaatattt
gtcaacacagaggacagttatgaggagctgcatctgatagtttataaggcgatgagtgca
gcagtttgttttatgatcagtgcatctgtggagctgacgagggagttctgtgagcagctg
gatggtctggtgggacctcagctcaccctgctggcctccgacatatgtgaacaatacaat
gtcaaccgcaggatatcagggccggacaaggagccccagttcaagttcatctacttcaac
cacatgaacctggcagagaagagcaccatccacatgaggaagacagccagcgtctctctg
acctcggtccacccagacctcatgaagattctgggagacatcaactgtgacttcgccagg
gttgatgaagatgaagagatcattgtgaaggctatgacagactactgggtggtcggcaag
aagtcggaccagagagaactctacgttatcttgaaccagaagaatgccaatttgattgaa
gttaatgaggaagtgaagaggctctgtgcgacacagttcaacaacattttcttcttggac
tga
DBGET
integrated database retrieval system
