Oncorhynchus nerka (sockeye salmon): 115144240
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Entry
115144240 CDS
T07952
Symbol
faap100
Name
(RefSeq) Fanconi anemia core complex-associated protein 100 isoform X1
KO
K10993
fanconi anemia core complex 100 kDa subunit
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115144240 (faap100)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115144240 (faap100)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
115144240 (faap100)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCAA
Motif
Other DBs
NCBI-GeneID:
115144240
NCBI-ProteinID:
XP_029540982
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All DBs
Position
LG16:19959725..19965669
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AA seq
901 aa
AA seq
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MDITILSAMEARCAVVETWAEFGCPSPGTAAKVIWSGEDVLICTGGDEVSVFNTQELKLT
AVLQFLSPVCHMVLSEDKQSVYAVCESDGVYCVSLPTLHPKSPTPPADQSPGPALIKVSS
NSLAARDEGVCSLIEVGGSGGTLVTVSLRDAAWWFTLYKAADHQKLTQFSLPVVSVGHHV
ESEENGSAGLVMRPVLACVYSSDAPPLSSSTTTKLPPLSSSLGVKHFLLEPLLFKLLFGV
DAALINSPMILCGLPDGRLCSLPLLLPGRSGPCVRVLHSMEQPIMFIGTTTGTNYGPQCL
VAVGQWGRVVLVRTCEGGPEEGGKVAALTEGCVSGPVVCVCAGREGLYYSTGSDLLALDL
PGVREEAPKPEESLVVGHGERQGQAMVRARESATLQSPVSLNVCRVIALAGPSHNASGIV
QLVALSLRGRLQRLTLPKGTETGGIPRLPLSQVGQRVRDLLAAIGDVCERASVLKSTIQS
KNHSLRHLNQVLNVCCLLLANQNSGEQLPVSKKPIRCHVVAKWSRLLQRDSLNLTCVLDN
SSPYILERNWTFCVRVLPLSYPLPAGGVNTSQTFSFPFQKLEPGGRMEVSLPLTVAGDTS
FPVTVSCSLTYSLQSLLGSEELSRLLANGEPASRLGLEGGLVSLPLDTLTVDWLDALQLT
GTTPPHRDPNRPPISPDTVSMDIVEAFVSTRRSRGSGRGDGEGGGERMVASDGGLFSASI
KVSTELLRGTLGLEPAGSAGPSQGVCGSVLGWLLSQGTGGEDWRCRGDNGGQESSVVYAR
CLGRHTVKLTAKEVTVGDTSVKEAVEVRVQCSSMAAVCGLHHAVLSRVQALLQGNASTQE
SSMGVQGLGLRQALQRAQVLSEHLQEARIPEAIGLGMTTGQTTKTLFSVYRQLRENPLLI
L
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atggacataactattctctcggctatggaggcgagatgtgctgttgttgagacttgggct
gagttcggatgtccttcgccgggtacagctgctaaagtgatctggtctggggaagatgtg
ttgatttgcactgggggcgacgaggtgtcggtcttcaacacacaagagctgaaactgacg
gctgttcttcagttcctgagtccagtgtgtcacatggtgctgagtgaggacaagcagtct
gtctatgctgtctgtgagagtgatggggtgtactgtgtcagtctaccaactctgcaccct
aagtcccccactcccccggctgaccaatcccctggccctgctctgatcaaggtgtcgtct
aattcgctggcagccagagacgagggggtgtgttctctgattgaggtgggagggtccggt
gggaccttggtgactgtctccctgagagacgcagcctggtggtttactctctataaagca
gctgaccaccagaaactgactcagtttagtctacctgtcgtttcagttggtcaccatgtc
gaatcagaggaaaatggttccgcaggactggtcatgagacctgtgttagcttgcgtttac
agcagtgatgcaccacccttatcatcctcaacaacaacaaaactaccacctttgtcatca
tcattaggcgtcaaacattttctcctggagcctctcctcttcaagctcctcttcggcgtc
gacgctgccctcatcaactcccccatgatcctttgcggcctgccagatgggcgtctctgc
tccctccccttacttctcccaggacgatcaggcccctgcgttagagttctacacagcatg
gagcagccaatcatgtttatcggaaccacgaccgggacaaattatggtccacagtgtttg
gtggcagtaggccaatgggggagggtggtgctggtcagaacctgtgaaggggggccggag
gaggggggcaaggtagcagcattaacagaggggtgtgtgtcggggcctgtggtgtgtgtg
tgtgcaggcagggagggcctgtactacagcacagggtcagatcttctagccctggatctc
ccaggggtgcgagaggaagctccaaagccagaagagagcctggtggtcggccacggggag
aggcaaggccaggccatggtgagagcaagggagtctgctaccctacagagtcctgtcagc
cttaatgtctgcagggtcattgccctggctgggccttcacacaatgcctcaggcatagtg
cagttggtggctttgtctctccgggggaggctccagcgtttaaccctgcctaaggggaca
gagacagggggcatacccaggctccccttatcacaggtgggacagagagtgagggacctc
cttgcagccatcggagatgtgtgtgagagagcatctgtgttgaaaagcaccatacagtcc
aaaaaccactccctcagacacctgaatcaggtgctcaatgtctgctgcctactgctagca
aatcagaacagtggagagcagctcccggtcagcaagaagccaatcaggtgtcacgttgtt
gccaagtggagccgcctgctacagagagactccctgaatctgacctgtgttctggacaat
tctagtccttacattctagaacggaactggacgttctgtgtgagagttctaccattatcc
taccctcttcctgcagggggggtgaacacctctcaaacattctcattcccattccagaaa
ctagagccaggtgggagaatggaagtgtcgttgcccctaacagtggcgggggacacatct
ttccctgtgacggttagctgctcgctcacctactccctgcaaagcctgctggggtctgag
gagctgtcccgcctcctggccaatggggagccggcatctcgtctgggattggagggtgga
ttggtcagtctgccccttgacacgctgacagtggattggctggatgctctgcagctgacc
gggaccacgccccctcacagggacccaaacagaccccccatttccccagataccgtctcg
atggatatcgttgaggccttcgtgagcacccgtcggagcaggggttctgggaggggggat
ggagaaggaggaggagagaggatggtggcgtctgatggggggctgttttcagcaagcatc
aaggtctcaacagagctactgagagggacactaggactggagccagcaggctctgctggc
ccttctcagggtgtgtgtggctctgtgctgggctggctgctgtcacaggggacaggagga
gaggactggaggtgcagaggggacaatggaggacaggaaagctctgtggtctacgcccgg
tgtctagggcgacacaccgtcaaactcacagccaaagaggtaactgtaggggacaccagt
gttaaggaggctgtggaggtgcgggtgcagtgctcctccatggcagccgtgtgtggacta
caccatgcagtgttaagccgtgttcaggctcttctccagggtaatgctagcacacaggag
tcctctatgggagtccagggactgggcttgagacaggccctacagcgggcacaggtccta
tctgagcatctccaggaggctcgtatcccagaagccattggactggggatgaccacggga
cagaccaccaagacactgttcagcgtttacaggcaactcagagagaaccccctcctcatc
ctctga
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