KEGG   Oncorhynchus nerka (sockeye salmon): 115144254
Entry
115144254         CDS       T07952                                 
Symbol
rac1
Name
(RefSeq) ras-related C3 botulinum toxin substrate 1
  KO
K04392  Ras-related C3 botulinum toxin substrate 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04010  MAPK signaling pathway
one04145  Phagosome
one04148  Efferocytosis
one04310  Wnt signaling pathway
one04370  VEGF signaling pathway
one04510  Focal adhesion
one04520  Adherens junction
one04530  Tight junction
one04620  Toll-like receptor signaling pathway
one04810  Regulation of actin cytoskeleton
one05100  Bacterial invasion of epithelial cells
one05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    115144254 (rac1)
   04310 Wnt signaling pathway
    115144254 (rac1)
   04370 VEGF signaling pathway
    115144254 (rac1)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    115144254 (rac1)
   04148 Efferocytosis
    115144254 (rac1)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115144254 (rac1)
   04520 Adherens junction
    115144254 (rac1)
   04530 Tight junction
    115144254 (rac1)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    115144254 (rac1)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    115144254 (rac1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115144254 (rac1)
   05100 Bacterial invasion of epithelial cells
    115144254 (rac1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115144254 (rac1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115144254 (rac1)
   04031 GTP-binding proteins [BR:one04031]
    115144254 (rac1)
Membrane trafficking [BR:one04131]
 Exocytosis
  Small GTPases and associated proteins
   Rho GTPases
    115144254 (rac1)
 Endocytosis
  Lipid raft mediated endocytosis
   Arf6-dependent endocytosis
    115144254 (rac1)
  Macropinocytosis
   Ras GTPases
    115144254 (rac1)
 Others
  NADPH oxidases (Nox) and associated proteins
   Nox associated proteins
    115144254 (rac1)
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115144254 (rac1)
  Exosomal proteins of other body fluids (saliva and urine)
   115144254 (rac1)
  Exosomal proteins of colorectal cancer cells
   115144254 (rac1)
  Exosomal proteins of bladder cancer cells
   115144254 (rac1)
GTP-binding proteins [BR:one04031]
 Small (monomeric) G-proteins
  Rho Family
   Rac/Cdc42 [OT]
    115144254 (rac1)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU CagD
Other DBs
NCBI-GeneID: 115144254
NCBI-ProteinID: XP_029541008
LinkDB
Position
LG16:19871910..19880977
AA seq 192 aa
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR
DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP
PVKKRKRKCSLL
NT seq 579 nt   +upstreamnt  +downstreamnt
atgcaggccatcaagtgtgttgtagtgggggacggagctgtgggtaaaacatgcctgctc
atcagctacaccaccaacgcgttccccggggaatacatccccacagtctttgacaactac
tctgccaatgtgatggtagatgggaaaccagtgaatctgggtctatgggatacagcagga
caggaagactacgacagactcagaccactgtcctatccacagacggatgtgtttttgatc
tgtttctctctcgtgagtcctgcctcctttgaaaacgtccgtgccaagtggtacccagag
gtgagacaccactgccccaacaccccaatcatcctggtgggcaccaagctggatctgaga
gatgacaaggacaccatcgagaagctgaaggagaagaaactcacccccattacctacccc
cagggtctggccatggcaaaagagattggagcagtaaagtacctggaatgctcagccttg
acacagcgtggccttaagacagtgtttgacgaagccatccgggcggtcttgtgtcccccg
cccgtcaagaagaggaagagaaagtgttcactactctaa

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